Gene Franean1_6954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6954 
Symbol 
ID5675267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8471885 
End bp8473405 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content66% 
IMG OID641245803 
Producthypothetical protein 
Protein accessionYP_001511194 
Protein GI158318686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.166118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAT CGGCATCCTT CGACACTGCC ACGACCGCTG CTATCGCGGT CATTCGCTCG 
GAGCTGGAGG ACCGTATCGC AGGAATACTG CACGGCTGTC GCGAACTACA CGGCGACAGC
AGCCGTCGCC TTCTTCTCTC CCAGGTCGAA CGGCATTCCG GCGTCGCGAT CCCGATTGCC
GAGTACCCCA GCTCCCGCCA GTGGTTCATA GGGTTCGTCG AGGCATGCTG CGGCACGCCG
GCCGGCATCC GGGCCATCAT CGCCGTCGCC CGTGTGTTCG GACTCGGCCC CGCGGTCACC
GTCCCGCTCA CCTGCCTCCA CGACGAGTGG GATGCCGCAC CCACAGCCGT CGACGCGGGA
GAGGATCTGT GGACCAGGCT CAGATCCGAG CTCACGGCGA CGACCCGGGC CGCGGCCGTC
GCCGCCTGCC GGCTCTCACC CCAGGCGGGG CTGTCGCTCC CGCCGGCGCA CTGCTCCAAC
GGCTGGCTGG TGCTGCTGCA TCTCGCCGGC CGCAACGCCG GCCCGGACGG GCTGCCGGTC
TACATCTCCT ATCTCGAAGG CATTCTCGAC CAGCTCTCAC CCGAGACGCG CGCCATGGTC
GAGCACTGGA ACCAACGCCG CGCCTACGAG CTGGGGCTGA CCGGCAAACT CAACGACACA
CGGCTCCGGA GGGGTGCCCG CGCCACCGCG GCACGGCAGA ATGTGCATGT CATTCTGCAG
TTTGAGCTGG ACCACCTGGA CCCGTCGACG CACCTGGTCT CCTGGTGGCG ACAATGGGAC
GAGGAGTCGG CGGTTTTCGA ACGAGGTGCC CGATTTTTTC CCGTCCCGTT GGGCGACCTG
GAGATGTTCA CCGAAAAAGT CGTGACCGAC ACCGAGGCTC TCCTCTCGGA GCGGGAGGAC
CAGATAATTC TTGAATTCGT CCTCCCCATC GACCTGATGC ACCTTCCCGT CGAACGCTGG
CCGAAGGAAA GCGGTTCGGT CCTGCCGAAG CAGCTCGGTT GCGACTATCC CGTCGTGGTG
CGAAGCCTGG AGCGGGTACA CAACCCGCAC TGGCGGCGGG CGTGGCGCAT ACGGTGGCGT
ATCCTGCACG AGAAGCAGGA TTCGGCGAGC ACGTGGCAGA TCAGGGACGA CGGAGACGGC
TACATCCAAA GGCTCGATGC CGACCTTCTC TCCGACGAGA ACCTGGTGGC CGCGGTCCTC
AGCGGCGCTC CCGCGCCGGC CCGCGCCACC GCGGCCGAAC TGGAGATCGT CCTGCGCTGT
GGCCTGCCCG TGATTCTGTG GCACCGTGAC GGCACCGCGG CCCCGACGGT TTCCGACGCG
GTGAAGGAGT TCGTCGATCT CGGCGGCCCG GCCGATCTCC GAGCGCGTAC CCACCGGCTC
CGACTCGACG CCGCACGCTC GGAAGTTTCA AAAGGCGATC ATCTCGGGCA CAATCTCGTT
ATTTTATGGG ATGACCCGAA CCGGCGGCCG GAGAGGGGTC CAGACGATTC CCTCTCCGTC
GGAGGAGAGG TGCAGCAGTG A
 
Protein sequence
MTASASFDTA TTAAIAVIRS ELEDRIAGIL HGCRELHGDS SRRLLLSQVE RHSGVAIPIA 
EYPSSRQWFI GFVEACCGTP AGIRAIIAVA RVFGLGPAVT VPLTCLHDEW DAAPTAVDAG
EDLWTRLRSE LTATTRAAAV AACRLSPQAG LSLPPAHCSN GWLVLLHLAG RNAGPDGLPV
YISYLEGILD QLSPETRAMV EHWNQRRAYE LGLTGKLNDT RLRRGARATA ARQNVHVILQ
FELDHLDPST HLVSWWRQWD EESAVFERGA RFFPVPLGDL EMFTEKVVTD TEALLSERED
QIILEFVLPI DLMHLPVERW PKESGSVLPK QLGCDYPVVV RSLERVHNPH WRRAWRIRWR
ILHEKQDSAS TWQIRDDGDG YIQRLDADLL SDENLVAAVL SGAPAPARAT AAELEIVLRC
GLPVILWHRD GTAAPTVSDA VKEFVDLGGP ADLRARTHRL RLDAARSEVS KGDHLGHNLV
ILWDDPNRRP ERGPDDSLSV GGEVQQ