| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6953 |
|---|
| Symbol | |
|---|
| ID | 5675266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8471100 |
|---|
| End bp | 8471825 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641245802 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511193 |
|---|
| Protein GI | 158318685 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.247532 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCCG ACGGATCAAA AGATCAGGTG CCGGACGGGG CGGGATCCAC CGCCGGCCCG
TGCGGACAAT CATGCGTCGA GATCGAGCAG GGCATCGTCG ACCTGCTCGA TCTGGCTCCG
ACTCTGGCCG CGGAAACCAG CCGGCGGTTG CTGGTCAGCA GGACCGAGAG GCGGCTCGGA
GTCCAGCTGC AGGTACCGGA CGCCCCCTAC CGCAGGCAGT GGTTCATAGG TTTCGTCGAC
GCCTGCTGTG CACACCCCAA GGGTCCGCGA GCACTTGCCC AGGCACTCTG TGTCCTGGAG
CCGGCTTCCG TCACCGCCCG GTCCGTACAG AACCTGGTGG ACTGTTGGGA GACAGCGAGA
TCCGCCGCGG GTCCGACCGC TGGAAACGGG CACGGCTCGC CCGCACAGGC ACCGTCGCAC
CGCGCGGAGG CCCCTGCGGG CGGAGACCTC ACGCCGGGCC GGGAGGACGA GGCGCTGACC
GGGCAGGAAT GCGCCGCGCT AGCCGCCGCC TTCCACACGG CCGTCGCGCA GCGGCAGGTT
CTGACGGATG CCGGCCTGCC GATCGACAAA CAGCCGAATC CGGACGGGCT CACGTCGGAG
GAGTTCTGGC GGGAGGTCAG TCGCCTACTC GCCGACGGAA TACTTACCGA CGGGCGACAA
CGCGTTCTTG CTGTGGCGCA CCATCGCTTT CCCGGTAACC GTTACCTGCG CAACGGACGC
CCGTGA
|
|---|
| Protein sequence | MASDGSKDQV PDGAGSTAGP CGQSCVEIEQ GIVDLLDLAP TLAAETSRRL LVSRTERRLG
VQLQVPDAPY RRQWFIGFVD ACCAHPKGPR ALAQALCVLE PASVTARSVQ NLVDCWETAR
SAAGPTAGNG HGSPAQAPSH RAEAPAGGDL TPGREDEALT GQECAALAAA FHTAVAQRQV
LTDAGLPIDK QPNPDGLTSE EFWREVSRLL ADGILTDGRQ RVLAVAHHRF PGNRYLRNGR
P
|
|---|
| |