Gene Franean1_6943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6943 
Symbol 
ID5675256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8460073 
End bp8460678 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content70% 
IMG OID641245792 
ProductDoxX family protein 
Protein accessionYP_001511183 
Protein GI158318675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.563199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGG TCATCCCGAT CGAGGAGGAC ACGATGCCTG TCACCACCGG TACGAAGGCC 
ACTGCCGCGG TCCGCTCGCC CCTGGCCGAC CTCAACCGCC GCCATCACCC GGGACGCCAC
AGCCTCGCCG TCGACGTCCT GCTCGCGGTC ACCCGGGTCG GCCTCGGCTG GATCTTCCTG
TGGGCGTTCC TCGACAAGCT GTTCGGCCTG GGCCACGAGA CCCCCTCAGC CCAGTCCTGG
GTCAACGGCG GCAGCCCCAC CGAGGGCTTC CTGGCCCACG CGGCCACCGG ACCGTTCGCC
GGGATCTACC ACGACATCGC CGGCGCGGCC TGGGCTGACT GGCTGTTCAT GATCGGCCTG
GCCGGTATCG GCGCGGCTCT CGTCCTCGGT GTCGGGATGC GCGCCGCCGC CGTCGCGGGT
GCCACCCTGC TCGTCCTCAT GTGGACCGCG GTTCTTCCCC CGGAAAACAA CCCCTTCATG
GACGACCACC TCGTCTACGC CCTAGTCCTC GGCCTTCTCG CCGCCTTCGG CGCTGGTCGT
TCCTTCGGCC TCGGCGGCTG GTGGGAGCGC ACGGCTCTCA CCCGTGGCCG GCCCTACCTG
ATCTGA
 
Protein sequence
MLVVIPIEED TMPVTTGTKA TAAVRSPLAD LNRRHHPGRH SLAVDVLLAV TRVGLGWIFL 
WAFLDKLFGL GHETPSAQSW VNGGSPTEGF LAHAATGPFA GIYHDIAGAA WADWLFMIGL
AGIGAALVLG VGMRAAAVAG ATLLVLMWTA VLPPENNPFM DDHLVYALVL GLLAAFGAGR
SFGLGGWWER TALTRGRPYL I