Gene Franean1_6939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6939 
Symbol 
ID5675252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8454241 
End bp8454954 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content75% 
IMG OID641245788 
Producthypothetical protein 
Protein accessionYP_001511179 
Protein GI158318671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.449982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.356444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC TGACGCAGAG CCCGCCGGCA CGACGCGGGG CGGGCCGTCG ACGGGTCGGG 
ACACTGGCGC TGGCGGCCGG TGTGCTGGCG CTCGGGCTGG CGGGCTGCGG CGGAGCGGAC
GACGGGGGCA CCGCCGGGCG CACCGCCTCG GCACCACCGG TGACCACGAC CGCCGGCACG
CCGTCGGCGA GCGTCGCAGC CAGGCCCACC GGGTCGCCCC GCGGCGGCCC GGCGTCGGCG
ACGCCGTCCC ACCTGTCCAC GACCCCGGGC GAACCCGCGT GGTCGAGTGA GCCGCGCCGC
GTCGAGCATG CGCTGCCCGG CACGGCGACG GTCGTCGCGG TGCGCGGCGC GCACAACGTC
GCCGGCGGGC TGGAGTTCGA CCGGCTGGTG ATCGAGTTCC GGGATCGCGT TCCCGGCTAT
GACGTGCGGT ACGTGGCCGA TGTGCGATCG CCGGGAGAGG GCGCGGTGGT CCCGCTGCGC
GGACAGGCGT TCCTCGAACT GGTGCTGTTC CCGGCGGCGG CCCACGACGA CGCCGGGACG
TCGACGCTGA CCACCCCGCG GACCGGTGGT GGGCTGCCCG CGCTCGTCCA GTACCGGCTG
ACCGGTGACT ACGAGGGCTA TGTCCACTTC GGCCTCGGCG TCGACGACAG GGTCGGCTTC
CGGGTGCTCG AACTGTCGGA TCCGGCGCGT CTGGTGGTTG ACCTCGCGGC CTGA
 
Protein sequence
MNRLTQSPPA RRGAGRRRVG TLALAAGVLA LGLAGCGGAD DGGTAGRTAS APPVTTTAGT 
PSASVAARPT GSPRGGPASA TPSHLSTTPG EPAWSSEPRR VEHALPGTAT VVAVRGAHNV
AGGLEFDRLV IEFRDRVPGY DVRYVADVRS PGEGAVVPLR GQAFLELVLF PAAAHDDAGT
STLTTPRTGG GLPALVQYRL TGDYEGYVHF GLGVDDRVGF RVLELSDPAR LVVDLAA