| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6926 |
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| Symbol | |
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| ID | 5675239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8436946 |
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| End bp | 8437731 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245775 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001511166 |
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| Protein GI | 158318658 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.591562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.131161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGACG ACGCGATAAA GACACCTGAC CAGCTCTTCG ACCTCACCGG ACGGGTCGCC
GTCGTGACCG GCGGCAGCCG GGGGATCGGC CGCGCGGTGG CCGGGGGGCT CGCCGCGGCC
GGCGCCGACA TCGTCATCGC CAGCCGCAAG ATCGAGGCCT GCCAGGCCGC GGCCGCCGAG
ATTGAGGCCG AGACCGGTCG GCGGGCGCTT CCCGTCGCCT GCCACGTCGG CCGGTGGGAC
GACTGCGACC GCCTCGCCGA CGCGGTCTAC GACAAGTTCG GCCGCTGCGA CGTCCTGGTG
AACAACGCCG GGATGTCCCC CGTCTACGAC ACCCTCACCT CGGTGACCCA GGAGCTCTAC
GACAAGGTCC ACGCGGTGAA CGCGGGCGGC CCGTTCCGGC TGAGCGCCCT CGTGGGATCG
AGGATGGCGG CCGGCGACGG CGGGTCGATC ATCAACGTGA CGACGGCGGG TTCGTTGCGC
CCCAACGCGA GCGATCTCCC CTACGCCATG GCGAAGGCGG CCCTCAACGC CCTGACTCTC
GGGCTGGCCG GCGCGTGGTC GCCCAAGGTG CGCGCGAACC TGGTGCTTCC CGGCGCGTTC
GACACCGACA TAACCAAGGC CTGGGGCCCG GACGCGAAGC GCCTGGCCGG CGAGATGAAT
CCGATGAAGC GGATTGGGGC ACCCGGAGAC ATGGTCGGCG TCTGCGTCTT CCTGGCGAGC
GCTGCGGCCA GCTATGTGAA CGGCGCACAG ATCCTCGTCG ACGGCGGCCT CTTCCGGACT
CTCTGA
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| Protein sequence | MADDAIKTPD QLFDLTGRVA VVTGGSRGIG RAVAGGLAAA GADIVIASRK IEACQAAAAE
IEAETGRRAL PVACHVGRWD DCDRLADAVY DKFGRCDVLV NNAGMSPVYD TLTSVTQELY
DKVHAVNAGG PFRLSALVGS RMAAGDGGSI INVTTAGSLR PNASDLPYAM AKAALNALTL
GLAGAWSPKV RANLVLPGAF DTDITKAWGP DAKRLAGEMN PMKRIGAPGD MVGVCVFLAS
AAASYVNGAQ ILVDGGLFRT L
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