Gene Franean1_6922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6922 
Symbol 
ID5675235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8431407 
End bp8432183 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content70% 
IMG OID641245771 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001511162 
Protein GI158318654 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.574858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGACA TGCCGGAGGA GATCGAGGTC CGCGCGGACG GGCCGCTGAG GATCATCACG 
CTGAACCGGC CCGACGATCT CAACGCGGTC AACCACCCCC TGCACGTCGG GCTGGCGAAG
CTCTGGCCGC AGCTGAACGA GGACCGCTCG GCGCGGGCTG CCGTGCTCAC CGGGGCCGGC
CGGGCGTTCT CCGCAGGAGG CGACTTCGCC TACCTCGACG AGCTGTTCAA GGACAAGGAG
CTGCGCGCCC TGTCCATCGC GCACGGGCGC GAGATCGTCC TCGGCATGGT TCGCTGCCGG
ATTCCCGTGG TCGCCGCGGT GAACGGCCCG GCCGTCGGTC TCGGTTGCAG CCTGGTCGCG
CTGAGCGACA TCGTCTACAT GGCGGAGAAG GCCTTCCTCG CGGACCCGCA CATCCAGGTC
GGCCTGGTGG CCGCCGACGG CGGGCCGCTG ACCTGGCCCC TGCACACCAG CATGCACCTG
GCCAAGGAGT ACGCGTTCAC CAGCGCGCGC ATCTCCGCCG AGCGGGCCAT CCAGATGGGG
CTGGCCAACC ACATCGCCGC CGATCCGGTG GCCGAGGCGC TGGCGTGCGC GAAGCGCATC
GCCGAGCTGC CGCAGCAGGC GGTGGAGACC ACCAAGCGGC TGCTCAACCT GCACGTCGAG
CGCGCCGTGA TCGCCTCGCT CGACTTCGCG ACAACCGCGG AGGAGGCGTC GTTCCAGACC
GATGACTTCG CCTCCATCGT CGAGCGGCTC TCCGCGAAGC AGAAGCAGAA GAGCTGA
 
Protein sequence
MYDMPEEIEV RADGPLRIIT LNRPDDLNAV NHPLHVGLAK LWPQLNEDRS ARAAVLTGAG 
RAFSAGGDFA YLDELFKDKE LRALSIAHGR EIVLGMVRCR IPVVAAVNGP AVGLGCSLVA
LSDIVYMAEK AFLADPHIQV GLVAADGGPL TWPLHTSMHL AKEYAFTSAR ISAERAIQMG
LANHIAADPV AEALACAKRI AELPQQAVET TKRLLNLHVE RAVIASLDFA TTAEEASFQT
DDFASIVERL SAKQKQKS