Gene Franean1_6898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6898 
Symbol 
ID5675211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8404263 
End bp8404568 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content65% 
IMG OID641245747 
Producthypothetical protein 
Protein accessionYP_001511138 
Protein GI158318630 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.56564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTT TCCTCGTCGT CATGGTCCTG CTCGGTCTGA TCGCCGGCGC GGTCGCGCGT 
CTGGTTCTTC CTGGCCCGGA CCCGATCGGA ATTCTCGGCA CGATCGCCGT AGGTATCGTC
GGGTCTTTCG TCGGGGGTTT CCTCGGCTAC GTCCTGTTCA ACAAGGACAT TGGTGAGGGC
GCGCTCCAGC CGTCCGGCAT CATCGGTTCC ATCATCGGCG CGATCATCGT GCTGGCGCTG
TGGAGGGCCT TCAACGGCCG TGGCCTCTCC CGCACCTCGC ACAGCCGTCG GTACGCCCGC
CGGTAA
 
Protein sequence
MLTFLVVMVL LGLIAGAVAR LVLPGPDPIG ILGTIAVGIV GSFVGGFLGY VLFNKDIGEG 
ALQPSGIIGS IIGAIIVLAL WRAFNGRGLS RTSHSRRYAR R