| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6897 |
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| Symbol | |
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| ID | 5675210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8402676 |
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| End bp | 8404154 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245746 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001511137 |
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| Protein GI | 158318629 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.587185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGACC GGACTGCGCT CGACCCGTTC TCCAGCATGG ACACCATGGA TGGCACGGAT
TCCGATCTCG CGGTACTCGT GATCATGGCT GGGGCGGCCG TCATCGGCTA CCTGGCGTCC
CTGCTCGTAC ACCGGATCCT GCGGCGGATC GGCCGGCACT CGCGGATTGT GGAGGATCTC
GCCGAACGGG GGCGCCGGCC CGCCCGGCTG ACGCTCGTCG TTCTGGGGCT GCTCATCGCG
GCGAACGCGA CGGTGGAGCA GTCGTGGACG CCGGCCACCA TCCGCGTGCT CGGCCTCGCG
CAGATCGCCG CGCTCGCGTG GGTGGTGGGC GTGCTGGCGT TCGTCATGGA GGACCTGGCG
CTGTCGCGCT ACCGGATGGA CGTCGCCGAC AACCGGCACG CGCGGCGGAT CCGTACCCAG
GTGATCCTGC TGCGCCGGAT CACCGTCGTC GTGATCACCG TGATCGCGGT CGCCTCGATG
CTGATGACCT TCCCGAGCGT GCGGGTCGCC GGCGCGAGCA TCGTGGCGTC GGCGGGCGTG
GTCGGCATCA TCGCCGGGCT CGCGGCGCAG ACGTCGCTGG CGAACGTCTT CGCCGGGCTG
CAGCTCGCCT TCACCGACGC CATCCGGGTC GACGACGTGG TGGTCGTCGA GGACGAGTGG
GGCCGGATCG AGGAGATCAC CCTCACCTAC GTGGTCGTGC ACATCTGGGA CGACCGGAGG
CTGATCCTGC CGTCGACCTA CTTCACCACC AACCCGTTCC AGAACTGGAC CCGCCGGGAG
TCCGCGGTGC TCGGCGCGGT GGAGTTCGAC CTGGACTGGT CGGTGCCCGT AGCCGACATG
CGGACCGAGA TGCACCGGAT CGTCGAGAGC ACCGACCTCT GGGACGGGCG GGTCAGCGTC
CTGCAGGTCA CCGACGCGGT CGGAGACCAC GTACGGATCC GGGTGCTGGT GAGCGGGAAC
GACGGGCCGA CGGTCTTCGA CCTGCGCTGC CATGTCCGCG AGGCGCTGGT CGACTGGCTG
CGGCACAACC ACGCGGCGGC GCTGCCGCGT ACCCGGATCG AGATCGACGC CACGGCGGCC
GGCGCCCGCG CCGGAGTCCA GGGCGGCGCG CGTTCCAACG GGCACCGCGT CGAACTGGGC
AAGGCCGGCC TGGGCCAGGC CAGGGCCGGC GAGGCCGAGC GGGGCAGGAC CGTGCCGGGC
ACGACGGCCG CCCAGCCGGA GGATCTCTCC GATGCCCGGC TCTTCGCCGG CAGTGCCGAG
GCCGAGGAGC GTTCCCGTGC GTTCAGCGAG ACCGGCGAGC ACTCCCCGGC CGACGGCTCC
GGCCTGGGTG ACGGCCCCAG CCCGACCGAC ACCCCCGGCC CGACCGACAC CCCCGGCCCG
ACCGACGGCT CCGGCCCGAC CGACGGCTCC GGTCTGACCG CTCCCAACCC CCGCGAGGCG
GACGGCAGCC ACACGCCTGA CCGTCCCTCG TCGAGGTGA
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| Protein sequence | MADRTALDPF SSMDTMDGTD SDLAVLVIMA GAAVIGYLAS LLVHRILRRI GRHSRIVEDL
AERGRRPARL TLVVLGLLIA ANATVEQSWT PATIRVLGLA QIAALAWVVG VLAFVMEDLA
LSRYRMDVAD NRHARRIRTQ VILLRRITVV VITVIAVASM LMTFPSVRVA GASIVASAGV
VGIIAGLAAQ TSLANVFAGL QLAFTDAIRV DDVVVVEDEW GRIEEITLTY VVVHIWDDRR
LILPSTYFTT NPFQNWTRRE SAVLGAVEFD LDWSVPVADM RTEMHRIVES TDLWDGRVSV
LQVTDAVGDH VRIRVLVSGN DGPTVFDLRC HVREALVDWL RHNHAAALPR TRIEIDATAA
GARAGVQGGA RSNGHRVELG KAGLGQARAG EAERGRTVPG TTAAQPEDLS DARLFAGSAE
AEERSRAFSE TGEHSPADGS GLGDGPSPTD TPGPTDTPGP TDGSGPTDGS GLTAPNPREA
DGSHTPDRPS SR
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