Gene Franean1_6885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6885 
Symbol 
ID5675198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8389736 
End bp8390344 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content77% 
IMG OID641245734 
ProductFHA domain-containing protein 
Protein accessionYP_001511125 
Protein GI158318617 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA GCACCATCCG GGTGACCACG GCCACGGGAA CGGTCGAGCT GACCCCGGAC 
CGGTCCTACG TGATCGGCCG CAGCCGCGAG GCGGACATCA CCGTCCAGGA CACGAAGGTC
TCCCGCCGGC ACGTCGAGCT CGCCCCGGGC CCGGACGGCT GGACGGCGCG TGACCTGAGC
ACCAACGGCG TCTGGAGCGA GGGGGCGCGG GCGAAGCAGT TCGCCGTCGA CGGCGAGATC
CGCATCCGGC TGGGCGGGCT GAGTGGTCCG GAGGTCCTGC TCCGGGCGTT CCGGCCGGTC
CAGCGCCCGC CGGCCGCGGC GCCGCGGCCG AAGCTCGACA ACGCCGATGC CGAGACCATG
CTGGCCGGGC AGGGCCGCCG GCCGGTCCCC GGGCAGGCCG CCCCGCCCGT CCCGGCCGCT
CGGACGCCTG AACCAGCGGG TGCCGGGGCC GGTTCCGCCG GGGCCAGCGC TGGCGCTGGT
GGCGGGGCTG GAGCTGGTGG CGGGGCCGCG CCGAGGCCCG CCCTGGGCGG TTGGCTGCGC
GCGCTGCCGA CCCTGGTCTG GCTCGCCGCC GTGGGATTCG CCCTCGGCGC CCTGGTCGCA
CTCTCCTGA
 
Protein sequence
MDLSTIRVTT ATGTVELTPD RSYVIGRSRE ADITVQDTKV SRRHVELAPG PDGWTARDLS 
TNGVWSEGAR AKQFAVDGEI RIRLGGLSGP EVLLRAFRPV QRPPAAAPRP KLDNADAETM
LAGQGRRPVP GQAAPPVPAA RTPEPAGAGA GSAGASAGAG GGAGAGGGAA PRPALGGWLR
ALPTLVWLAA VGFALGALVA LS