Gene Franean1_6881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6881 
Symbol 
ID5675194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8386074 
End bp8386943 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content64% 
IMG OID641245730 
Productnitrogenase iron protein 
Protein accessionYP_001511121 
Protein GI158318613 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.82086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGA TCGCGTTCTA CGGCAAGGGT GGTATTGGCA AGTCCACCAC CCAGCAGAAC 
ACCATGGCTG CCATGGCCGA GATGGGCCGT CGCGTCATGA TCGTCGGCTG CGACCCCAAG
GCTGACTCGA CCCGCCTCAT CCTGCACTCG AAGGCCCAGA CGTCCGTCAT CCAGCTCGCG
GCGGAGAAGG GCTCGGTCGA GGACCTGGAG CTGGACGAGG TCCTGGTCGA GGGCCAGTGG
GGCATCAAGT GCGTCGAGTC CGGTGGCCCG GAGCCGGGCG TGGGCTGCGC CGGCCGTGGC
GTCATCACCT CCATCACCTA CCTGGAGGAG GCCGGCGCCT ACGAGAACCT CGACTTCGTC
ACCTACGACG TCCTCGGCGA CGTTGTCTGC GGTGGCTTCG CGATGCCGAT CCGCCAGGGC
AAGGCCCAGG AGATCTACAT CGTGACCTCC GGCGAGATGA TGGCGATGTA CGCGGCGAAC
AACATCGCCC GCGGTGTCCT CAAGTACGCG CACTCCGGCG GTGTCCGCCT CGGTGGGCTC
ATCTGCAACA GCCGTAACAC CGACCGCGAG GACGAGCTGA TCATCGAGCT CGCCCGCCGT
CTCAACACCC AGATGATCCA CTTCATCCCG CGTAACAACG TCGTGCAGCA CGCCGAGCTG
CGCCGGATGA CGGTCATCGA GTACGACCCC GAGAACAGCC AGGCCAACGA GTACCGCCAG
CTGGCCAAGA AGATCGACGA GAACGACATG AAGACCATCC CCACCCCGAT CAGCATGGAC
GAGCTCGAGG AACTGCTGAT CGAGTTCGGG ATCATGGAGC AGGAAGACGA GTCGATCATC
GGCCAGAAGG CCAACGCGAC CGTCGCCTGA
 
Protein sequence
MRQIAFYGKG GIGKSTTQQN TMAAMAEMGR RVMIVGCDPK ADSTRLILHS KAQTSVIQLA 
AEKGSVEDLE LDEVLVEGQW GIKCVESGGP EPGVGCAGRG VITSITYLEE AGAYENLDFV
TYDVLGDVVC GGFAMPIRQG KAQEIYIVTS GEMMAMYAAN NIARGVLKYA HSGGVRLGGL
ICNSRNTDRE DELIIELARR LNTQMIHFIP RNNVVQHAEL RRMTVIEYDP ENSQANEYRQ
LAKKIDENDM KTIPTPISMD ELEELLIEFG IMEQEDESII GQKANATVA