| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6875 |
|---|
| Symbol | |
|---|
| ID | 5675188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8378869 |
|---|
| End bp | 8379336 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641245724 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511115 |
|---|
| Protein GI | 158318607 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02935] probable nitrogen fixation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.268079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC CGGCCCCCAC CGCAGGCGGC CAGTTCGAGG GGTTCCTGCG GGATCTCGTC
GACCAGCTCC GCGCCGGCGA CACCTACGGC AACCTCGACC GACTGCCCGA CGCGCAGCTG
ATCAGCCCGT TCATTCTGAC CCGCGAGCAG CGGCGGCAGA TCGCCTCCAA CTGCGACATC
GACGCCGTCA TCGAGGGGCG CGTGCGCTCC TTCTACCAGG CCGTCGCCGC CTCGGTGGAG
AAGACGACCG GGGTCATCAC CACCACCGTG CTCGACCTCA ACCACGAGGG CTTCGGCCGG
GTGATCGTGT TCGGTGGGCG GCTGGTGGTG CTCTCCGACG TCCTGCGCGA CGTCCAGCGC
TTCGGCTTCA ACTCGCTCGA GGATCTCGCC GCCCGTGGCG AGGCCATGGT CACCGCCGCC
GCCAAGCTCG TCGACCAGTG GAGGGAGGTC GCCCGCGATG ACTCCTGA
|
|---|
| Protein sequence | MTAPAPTAGG QFEGFLRDLV DQLRAGDTYG NLDRLPDAQL ISPFILTREQ RRQIASNCDI
DAVIEGRVRS FYQAVAASVE KTTGVITTTV LDLNHEGFGR VIVFGGRLVV LSDVLRDVQR
FGFNSLEDLA ARGEAMVTAA AKLVDQWREV ARDDS
|
|---|
| |