Gene Franean1_6870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6870 
Symbol 
ID5675183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8375311 
End bp8375931 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content70% 
IMG OID641245719 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_001511110 
Protein GI158318602 
COG category[O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.262975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG TCCAGAGCAC CATCGAACTG ACCGAGCGCG CCCGCGCCCA GGTGCGGACC 
CTGCTCAGCG GCAGCGTGGA GACGGCCGGC TTCGGCCTGC GCGTGGGCGT GAACCCGGGT
GGCTGTTCCG GCCTCACCTA CAACCTGGCG CTCGCCCCCG GAGCCGAGAG CGACGACATC
GTCATCCACT CCGACGGGTT CGACGTCTTC GTCAACTCGT CGATGATGGG GCATCTGAGG
GGGCTGCGGA TCGACTATGT CGAGTCGCTG ACCTCCTCCG GGTTCACCTT CACCAACCCG
AACGCGACCA GCTCGTGCGG CTGCGGCAAC TCGTTCGGCA CCCCGGAGGA GCCCGAGCGC
GCCGAGGCCG ACGACCGGCT GCGCGGCCAG GTCGAGGACG TCATCGCCGA GATCCGGCCG
TTCCTGCAGG GTGACGGCGG CGACGTGCAA CTCGTCACCG TGCTCGCGGG CAACGGGGAG
CCGGGCACCG CCGAGGTCCA CATCCGGCTT GTCGGCGCCT GCAACGGCTG CTCCAGCGCC
TCGGCCACCG TCACCGCGGT GATCGAGAAG CGCATCAAGG AGAGCCTGCC CGAGATCGGC
CGCGTCGCCC TCGTCTCCTG A
 
Protein sequence
MTLVQSTIEL TERARAQVRT LLSGSVETAG FGLRVGVNPG GCSGLTYNLA LAPGAESDDI 
VIHSDGFDVF VNSSMMGHLR GLRIDYVESL TSSGFTFTNP NATSSCGCGN SFGTPEEPER
AEADDRLRGQ VEDVIAEIRP FLQGDGGDVQ LVTVLAGNGE PGTAEVHIRL VGACNGCSSA
SATVTAVIEK RIKESLPEIG RVALVS