Gene Franean1_6865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6865 
Symbol 
ID5675178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8369668 
End bp8370009 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content65% 
IMG OID641245714 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001511105 
Protein GI158318597 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.532359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.732322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACG TCGTCACGTC ACCCTGCATC GACGTCAAAG ACACAGCCTG CCTGGACGAA 
TGCCCGGTCG ACGCCATCTA CGAGGGCGAC CGGAAGCTCT ACATCAATCC GAACGAGTGC
ACGGAATGCG GCGCGTGTGC GTCCGCCTGC CCGATCGGCG CCATCATGCT CGACCTGGAG
GTTCCCAAGG CCGAGCGCCC CTTCGTGAAG AGCGAGAAGG AGTTCTTCAC CAAGGTCCTG
CCCGGCCGGG ACGAGCCGCT CGGCGATCCC GGTGGCGCCA AGACCGTGGG CAAGATCAAG
GCTGACACGC CCTTCGTGGC CGAGTACGAG GCCTCCGCCT GA
 
Protein sequence
MPYVVTSPCI DVKDTACLDE CPVDAIYEGD RKLYINPNEC TECGACASAC PIGAIMLDLE 
VPKAERPFVK SEKEFFTKVL PGRDEPLGDP GGAKTVGKIK ADTPFVAEYE ASA