| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6864 |
|---|
| Symbol | |
|---|
| ID | 5675177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8367903 |
|---|
| End bp | 8369504 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641245713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511104 |
|---|
| Protein GI | 158318596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.865283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGTGC CCGGGTCTTC GGGCCCGCTC CCGTCCGCTG CCGGGACGGA CGGGCCCGCC
GGGAGCGGTG CGGGCGAGGA CGTGATCGCG CGGACGCTGC CGTACGAGCG CCTCGGCACG
CCGGGCTCGC CGATGCGGCC GGACAAGACT CTCCTCAGCT CCGTGGCTCG GACCAGTGCC
ACCAGCCAGA GCAGCCCCGC CAACTCGGGC AGCTCAACCA GCACGGACAG CCCCACCCAT
TCGGACAGCC CTTTCCGCCA GCGGGCCTCT GCCGGCCTGG GCAGCCCCGT GAGCAAGGGC
GGGGGCCCGG TTGGGAGCAC CAGCGAGAAC CCCGTCCCGG ACGGGCCAGG GCCCGGAGCC
AGGCCCGAAG CCGAAGCCGG AGCCGAAGCC GCGGACCCGG ACGAAGCTGC CCAGGCGCCA
GGGGCCGGAG GCCAGGGGAA GGACAGCCGC CGCGGCGGGA ATCACCGCGG CGGGACGGCT
CGTCGAGGTA GGCCGCGCCG ACGACGTCGC ACCGTGCTCG GGGTCGCCGC CGCCGCGATG
GTCATCCTGC TCGGCGCGAT CGGCCTGGTG ACGCTCACCG GCGGCCCGGA TTCGCGGCGT
TCGGCCGATG CCCCGGCGGC GAGTCAGGCC CCGGATACGG CGAAGGCGCC CGGGGCGCAG
CCCGCGCAGC CGGAGCCGGC ACCGACCGGG CCGGCCGCGC CGGGGGTGCG GTGGCCCTCC
GGGGCGAACG GGAACCCGCC ACTGGACATC CGCGCCTGGG AGGCGTGGAC GGGGCGGCTG
ACGAACGTCG CGGTCGTCTT CACGAAACGT AATGACTGGA ACCAGATCGC CTACGACAAC
TGGCCGATGT CGGACTACCC GCCGGGGGTG TACAACGGGC AGCTTTCCAT CGCCCAGCCG
CTGTTCCCGC GGTCGGGTGA CGAGCGGACC TGCGCCCGGG GTCACTATGA CGCCTACTGG
GCGGCGTTCG GCCAGACCCT GACGCGTAAC GGCCGGCCCG ACGCCATCGT CCGGCTCGGC
TGGGAGTTCA ACGGGAACTG GTTCTGGTGG TATCCGCGGG ACACCGCGAC CTGGAAGACC
TGTTTCCAGC GGGCGGTCAC CCAGATCCGG TCGACGGCGC CGGCGGTGCG GATCGACTTC
AACGTCAGCG CGCACCGTGA CCGGATGCCG AACGGTGACG ACGTGTGGGC GGCCTACCCG
GGCGACGAGT TCGTGAGCAT CGTCAGCAGT GACGCCTACG ACTCCTACCC GCCGTCGCGC
TCCGCGGAGA CCTTCGACCA GCAGTGCAAC ATTCCGTCGG GGGCGTGCAC CGTGGCCGCG
TTCGCGCGGG CGCACGGCAA GCAGTTCGCG GTGCCGGAGT GGGGGCTCGT CCGGGTGGAC
GGGAACGGCG GCGGCGACAA TCCGCTCTTC ATCGAGAAGA TGCACGACCT GTTCGACCGG
AACCGGGACA TCCTCGCCTA CGAGGCGTAT TTCAGCACCG CCGAGGCGGA CAACGTGCGT
TCCTCGCTGA TCAACCCGCC GCTGAACCCG ATGGCCGCGC AGCGGTACCT GGAGCTGTTC
GGTGCCGGGG CCGGCGGCAG TGGCAGCCCC GGCGGCCTGT GA
|
|---|
| Protein sequence | MDVPGSSGPL PSAAGTDGPA GSGAGEDVIA RTLPYERLGT PGSPMRPDKT LLSSVARTSA
TSQSSPANSG SSTSTDSPTH SDSPFRQRAS AGLGSPVSKG GGPVGSTSEN PVPDGPGPGA
RPEAEAGAEA ADPDEAAQAP GAGGQGKDSR RGGNHRGGTA RRGRPRRRRR TVLGVAAAAM
VILLGAIGLV TLTGGPDSRR SADAPAASQA PDTAKAPGAQ PAQPEPAPTG PAAPGVRWPS
GANGNPPLDI RAWEAWTGRL TNVAVVFTKR NDWNQIAYDN WPMSDYPPGV YNGQLSIAQP
LFPRSGDERT CARGHYDAYW AAFGQTLTRN GRPDAIVRLG WEFNGNWFWW YPRDTATWKT
CFQRAVTQIR STAPAVRIDF NVSAHRDRMP NGDDVWAAYP GDEFVSIVSS DAYDSYPPSR
SAETFDQQCN IPSGACTVAA FARAHGKQFA VPEWGLVRVD GNGGGDNPLF IEKMHDLFDR
NRDILAYEAY FSTAEADNVR SSLINPPLNP MAAQRYLELF GAGAGGSGSP GGL
|
|---|
| |