| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6852 |
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| Symbol | |
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| ID | 5675165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8352941 |
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| End bp | 8353723 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245701 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001511092 |
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| Protein GI | 158318584 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.150253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGG TTCCCGACCA GTTCGGGTTG TTCGACCTGT TCGCCCTCAA GGACCGGGTC
GCGGTGGTGA CCGGCGCGTC GTCCGGCCTC GGCGCGGGCA TCGCGCGGGC GCTGGCCACG
GCCGGTGCCC GGGTGGCCGT GGTGGCGCGC CGCCGCGACC GGCTCCTCGC GCTCGCGGAG
GAGCTGGGCG GCCTGGCCGT CGGCGCCGAC CTGCTCGACC CGGAGCAGGT CGACGCGGTG
GTGCCGCAGG TCGCCGCCGA GCTCGGCGGG CCGGAGATCC TGGTGAACGC CGCCGGCGCC
CGCCTCACCG AGGAACGCGC CGAGAGCGAG CCGATCGACG CCATCAACCG GACCCTGGCG
CTGAACCTGG TGGCTCCGCT CCGGCTCAGC CAGGCGGTGT TCCCGCACAT GAAGGCGGCC
GGGCGGGGCT CGGTGGTCAA CATCTCGTCG ATCAGCGGCA TCGTCGGCGT CCCCGGCATC
CCGCAGGCGT CGTACGCCGC GAGCAAGGCG GGGCTGTCCG GGCTCACCTC CGAGCTGGCC
GTCCAGTGGG CGCGGCACGA GATCCGGGTC AACACCATCG CCCCGGGCTT CTTCCGTAGC
GAGATCACCG ACAGCCTGTA CGACACCGAG AGCGGCCAGA ACTGGCTGCG GCGGAACACC
CCGCTGCCCG GCGACGGCCG GGTGGAGGAC TTCCTCGGCG CGGTCCTGTG GCTGGTCAGC
GACGCGGGCC GGTACGTGAC CGGCCAGACC ATCGCGGTGG ACGGCGGCTG GACGGCCCGC
TGA
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| Protein sequence | MTAVPDQFGL FDLFALKDRV AVVTGASSGL GAGIARALAT AGARVAVVAR RRDRLLALAE
ELGGLAVGAD LLDPEQVDAV VPQVAAELGG PEILVNAAGA RLTEERAESE PIDAINRTLA
LNLVAPLRLS QAVFPHMKAA GRGSVVNISS ISGIVGVPGI PQASYAASKA GLSGLTSELA
VQWARHEIRV NTIAPGFFRS EITDSLYDTE SGQNWLRRNT PLPGDGRVED FLGAVLWLVS
DAGRYVTGQT IAVDGGWTAR
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