Gene Franean1_6834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6834 
Symbol 
ID5675147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8328242 
End bp8329225 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content74% 
IMG OID641245683 
Productluciferase family protein 
Protein accessionYP_001511074 
Protein GI158318566 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGGCA ATCGCATCGT CTTCGGAGCA GCGGCCCTCC CCGAGCCGGA CCGGGCGTGG 
CTCGCCGCCG CAGAGCGCCT CCCGATCGAG TCCGTCTGGC AGGGCGGCCA CATCCTCCCC
CGGACGGGCA CCGGAGAGGT GATCACCCGG CTGGCGCTGA TGACCGCGTG GACGGAGCGC
GTCCGCGTCG GCACCTCGAT CCTGCTCGCC CCGCTCTACC CCCCGGTGAT CATCGCCAAG
CAGCTCGCCG ACCTGGACGT CCACAGCGGC GGCCGGATCT CGGTCGGGGT TGGCGTCGGC
GGCGAGTTCC CCCAGGAGTT CGACGCCGTC GGCGTGCCCG TCGCCGAGCG CGGGGCGCGC
ACCGACGAGA CCCTGGACAT CCTCCGGGCG CTGTGGTCCG GCGAGCCGGT GACCCACCAC
GGGAAGTTCT TCCACCTCGA CGAGGCGAAG CTCGTCCCGG TCGAGCTGCG CGGCGCGGAC
CGGCCGGGCG GGCGCCCCGG CGGCCCGCCG CTGCTGATCT CCGGCCGCAA GGGGCCCGCC
ATGCGCCGCG CCGCCCGCGT CGGCGACGGC TGGATGCCCT ACCTGATGTC ACCGGACGCC
TACGCCCGCA CGGTCGGCAC CGTCCGCGAG CACGCCGCCA CGGCCGGCCG CGACCTGGAG
AAGTCCGGCT TCGAGTGGAT GATGTACGTC TACTGCTCGA TCCGCCCCGA CGGCGACCGC
GCCCGCGACG ACGTCGCGTC GTTCCTCGGC GGCGCCTACG GGAACAAGCC CGGCGGCATG
CTCGAGCGGG TCGCCCCGGC CGGCACACCC GAGGAGGTCA CCGCCCGCTT CCAGCAGTAC
GTGGACGCGG GGGTGCGCCA CTTCATCATC TCCCCGGCGG CGCACGAGGA CACCCTCGAG
GTGATCACTC TCGCGGCCAG GGAGGTACTG CCCCGCCTCA CGCTGCCGGC GGACGGGCTG
CCGGCGGACG AGGTCGCACC GTGA
 
Protein sequence
MPGNRIVFGA AALPEPDRAW LAAAERLPIE SVWQGGHILP RTGTGEVITR LALMTAWTER 
VRVGTSILLA PLYPPVIIAK QLADLDVHSG GRISVGVGVG GEFPQEFDAV GVPVAERGAR
TDETLDILRA LWSGEPVTHH GKFFHLDEAK LVPVELRGAD RPGGRPGGPP LLISGRKGPA
MRRAARVGDG WMPYLMSPDA YARTVGTVRE HAATAGRDLE KSGFEWMMYV YCSIRPDGDR
ARDDVASFLG GAYGNKPGGM LERVAPAGTP EEVTARFQQY VDAGVRHFII SPAAHEDTLE
VITLAAREVL PRLTLPADGL PADEVAP