| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6831 |
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| Symbol | |
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| ID | 5675144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8325587 |
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| End bp | 8326420 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641245680 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001511071 |
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| Protein GI | 158318563 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAA GTTCTGGACG GGTCGAGGGA AAGGTCGCCA TCGTCACCGG AGCCGGCTCC
ACGCCGGGCG ACGGGATAGG CACCGGCAAG GCCAGCGCAG TGGTGCTCGC CCGGGAGGGC
GCGAGCGTCC TGCTCGTCGA CCTGTACCCC GAACGCGCCG AGCTGACCTT AAAGATGATT
GAGGAGGAGG GCGGCAAGGC GAAGGTGTTC GCCGCCGACG TCACCCAGGC GGCCCAGTGC
GAGGCGATGG TCGCGGCGGC CGTCGAGAAC TTCGGCACGG TCGACATCCT CGTCAACAAC
ATCGGGCTGG CCTCGCTGGG CACCGTCGTG GACCTCTCGG AGGAGGCCTG GGACCGCGCC
CTCGACGTCA ACCTGCGCAC GGTCTTCCTG GCGTCGAAGT ACGCCGTGCC GGTGATGGCC
GCGCAGGGCT CCGGCTCGAT CGTCAACATC TCGTCGATCT CCGCGCTGCG CGGCGACGGC
ACGATCGCCT ACTCGGCGGC CAAGGGCGCG ATGCTTGCCA TGACCGTCGA CATGGCCTAC
TCGCACGGCC GGCAGGGCAT CCGGGTCAAC GCGATCGCCC CCGGGCACAT CACCACCCCG
ATGGTGAACT CCGTGTCGGG GCAGGACCCG CGGGCCGACT TCCGCACGAA GCTGCGCAAC
GAGGCCGGCC TGCTCGGCAC CCCGGGCACC GGCTGGGACG TCGGCTGGGC CGCGGCCTTC
CTCGCCTCCG ACGAGGCACG CTGGATCACC GGCATCACCA TGCCGGTGGA CTCCGGAGTC
CTCAGCATCA CGCCGCTGTC GATGGCGCAG TACCTGCGCG CCATCCCGGA TTGA
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| Protein sequence | MARSSGRVEG KVAIVTGAGS TPGDGIGTGK ASAVVLAREG ASVLLVDLYP ERAELTLKMI
EEEGGKAKVF AADVTQAAQC EAMVAAAVEN FGTVDILVNN IGLASLGTVV DLSEEAWDRA
LDVNLRTVFL ASKYAVPVMA AQGSGSIVNI SSISALRGDG TIAYSAAKGA MLAMTVDMAY
SHGRQGIRVN AIAPGHITTP MVNSVSGQDP RADFRTKLRN EAGLLGTPGT GWDVGWAAAF
LASDEARWIT GITMPVDSGV LSITPLSMAQ YLRAIPD
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