| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6826 |
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| Symbol | |
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| ID | 5675139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8318701 |
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| End bp | 8320272 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245675 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001511066 |
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| Protein GI | 158318558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA GCGAAGTCTC GAACGGAGCG AGCCCGGACT CCGGCCCGGG CTCCGGAGCC
GGGACGGACG CTCCGTCACG AGCCAGCGCC ATCGTCGCCG TCCTGGCCGC GGTCGGCGTC
CTGGTCTCGC TCATGCAGAC GCTGATGGTG CCGCTGATCC CGGTACTGCC GAAGCTCCTG
CACTCCAACG CGAGCGACGC GTCCTGGGCC ATCACGGCGA CCCTGCTCAC CGGGGCCGTC
GCGAACCCGG TCTTCGGCCG GCTCGGCGAC CTGTTCGGCA AGCGGCGGAT GCTCCTGCTC
TCCGGCTACA TCCTCGTGGC GGGCTCGCTG GTCTGTGCCC TGACCGACTC CCTGGTGCCG
ATCGTGGCAG GCCGGGCCCT GCAGGGCCTC GGCCTGGCGA TCATCCCGCT GGGCATCAGC
ATCATGCGTG ACCTTCTCCC GCCGAAGCGG CTGATCCCGG CCATGGCCCT GATGAGCTCG
TCGCTCGGCA TCGGCGGCGC GCTGGGACTG CCGATCGCGG CGATCGTCGC GCAGAACCTC
GACTGGCATG TGCTGTTCTG GGGTTCGGCC ATCGCCACCC TGATCCTCGT GGCGCTGGTC
ACGGTCGTGG TCCCCGAGTC CCCCGTCCGG GGTTCCGGCA GCTTCGACCT GCCCGGAGCA
GTGGCCCTCT CCGCGGGCCT CGTCGCGCTG CTGCTCGCCG TGTCGAAGGG AAGCACCTGG
GGCTGGTCCA GCGCCACCAC CCTGGGGCTG TTCGGAGCCG CGGTCGCCGT CCTGCTGGCC
TGGGGCCGGT GGGAGACCCG CGCGAAGGCC CCGCTGGTCG ACCTGCGCAC CTCGACCCGG
CGCCCGGTGC TCCTGACGAA CCTGTCCTCC ACCGTGCTGG GCTTCGCGAT GTACGCGATG
TCGCTGATCT GCCCGCAGAT CATGCAGCTA CCCAGGGCCA CCGGGCACGG CCTCGGCCAG
TCACTGCTCG CCACCGGCCT GTGGATGGCG CCGGCGGGGC TGATGATGAT GGTCGTCTCG
CCCTTCGCTG GACGCCTGAT CACCGCCCGC GGGCCGAAGG TCGCCCTCCT CTCCGGCACA
GCTGTGATGA CCGTCGGATA CGTCGCCGCG CTCGGGCTGA TGGGCAGCCC CGTGGGCGTC
CTGGTCATCG CCTGTTCGAT CAGCGGCGGC GTGGGGCTCG CCTACGCGGC GATGCCAACC
CTGATCATGG CCTCGGTGCC CGCTTCCGAA GGCGCCGCCG CCAACGGCCT CAACACCCTG
ATGCGCTCCA TCGGGACGTC GACGGCCAGT GCCGTGATCG GCGTCGTGCT GGCGAACATG
ACCATCTCCT TCGGGACGAC GCAGGTCCCG TCACTGACCG GCCTGCGCGT CGGCTTCCTG
ATCGGCGCCG GCGCCGCACT GGTGGCCTTC CTGGTAGCCC TCGCCATCCC GGCCCGCAAG
TCGGCCGCAC CCGCCTCCGT CGTTCCCGAC CAGCGCAGCC CGCACGACCG GTCGACCGGG
GCCGCTGGGG CCGCCGCCGG TTCCGTGGCG GAGGGCGCCG CAGCGACGGA CGCGGTCGAG
GCAAGGGCCT GA
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| Protein sequence | MDASEVSNGA SPDSGPGSGA GTDAPSRASA IVAVLAAVGV LVSLMQTLMV PLIPVLPKLL
HSNASDASWA ITATLLTGAV ANPVFGRLGD LFGKRRMLLL SGYILVAGSL VCALTDSLVP
IVAGRALQGL GLAIIPLGIS IMRDLLPPKR LIPAMALMSS SLGIGGALGL PIAAIVAQNL
DWHVLFWGSA IATLILVALV TVVVPESPVR GSGSFDLPGA VALSAGLVAL LLAVSKGSTW
GWSSATTLGL FGAAVAVLLA WGRWETRAKA PLVDLRTSTR RPVLLTNLSS TVLGFAMYAM
SLICPQIMQL PRATGHGLGQ SLLATGLWMA PAGLMMMVVS PFAGRLITAR GPKVALLSGT
AVMTVGYVAA LGLMGSPVGV LVIACSISGG VGLAYAAMPT LIMASVPASE GAAANGLNTL
MRSIGTSTAS AVIGVVLANM TISFGTTQVP SLTGLRVGFL IGAGAALVAF LVALAIPARK
SAAPASVVPD QRSPHDRSTG AAGAAAGSVA EGAAATDAVE ARA
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