Gene Franean1_6825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6825 
Symbol 
ID5675138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8317001 
End bp8318419 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content73% 
IMG OID641245674 
Productcarboxylesterase type B 
Protein accessionYP_001511065 
Protein GI158318557 
COG category[I] Lipid transport and metabolism 
COG ID[COG2272] Carboxylesterase type B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.788478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTG TAAGGCGCCT GGCGGCCGGT CACGTCCGGG GCGACTATCT CGATGGCATC 
GCGGTATTCA GCGGGATCCC CTACGCCGCC CCGCTGGACG GCCCCGCCCG CTTCGCCGCC
CCCCGCTTAC CCGAGCGGTG GACGGGCACC CTGGACGCCA CCAGGTTCAG CCCCAGCCCG
CCGCAGACCT CGTGGATGGG AGGGTCGGAG TCGCTGTGGC ATCCCGGCGA CGGCACCGAC
TGCCTGAGCG TGAACGTGTG GACGCCCGAT CCCACCGGCC GTGGTCTTCC GGTGCTGGTG
TGGTTCTACG GCGGCGCGTT CCTGATCGGC TCCGCCAGCC AGCCGGAGTA CGACGGCGCG
ACGCTCGCCC GCGGGGGAGC GGTCGTGGTG ACCGTGAACT ACCGGGTCGG CTTCGAGGGG
TTCGGCTGGC TGCCCGACGC GCCGCTCAAC CGCGGCCTGC TCGACCAGCT GGCCGCGCTG
CACTGGGTGC GGGACAACAT CGCGCAGTTC GGCGGCGACC CTGGCAATGT GACGATCATG
GGCCAGTCTG CGGGCGGTAC CTCGGTGGCC GTGCTGGTGG CGGCGGACGA GGGGCGGGGG
CTGTTCAACC GCGCGATCGC CCAGAGCGTC GCCGGTGGCT TCCTCACCCC GGAGCGCGCC
CGGGCGACCT CCGAGCGCAT CGCCGCGGCC CTCGGGGTGC GCGCCACCGC CAGCGACCTG
GCAGCCGTGC GCCCCGAGGC CATCCACGCA GTTCAGCATG AGGAAGGCCA GATCACGCCG
TACGGGCCGA TCCTGGGTGG GGAGCTCGTC CCCGGTCTGC CGTGGCGGCG GCTGCGCGGC
GAGGTCGATC TCGTGGCCGG CTCCACCCGT GACGAGTACC GGCTGTTCGC CATCGCGGCG
GGCGTGGCGG ACGCCGATCT GGCGGCGACC GCGGTGACGG TCGGCCTGCC GCCCTCGGCG
GCCGGTGCCT ACCGGGCGGC CCACCCGGAT CTGTCCGATG CCGACCTGAA CGCGATGATC
CTCTCCGACG GCGCCTTCCG GATGCCCTCG CTGTGGTGCG TCGGCAACCA TCCCGGCCGC
GCCTACTGCT ACGAGTTCGC CTGGCAGAGC CCCGCCTTCG CGGGCGCGCT CGGCGCCTGC
CACGGCATCG ACACCCCACT CACGTTCGGC AACTTCGTCG GGACGATGTC GTCGATGCTG
CTCGGCAATC CCGTCCCGGC CGGGGTTGTC GACCTGTCGG AGCAGATGCG CTCGGCCTGG
ATCTCGTTCG CCGCGACCGG CGACCCCGGA TGGCCGGTCT ACCGGGCGGG CAAGGCGATC
ACCCGCATCT GGGACGTGCC GTCCCGCCTC GCGGCCGATC CGCAGGCGGT GTCCCGCCAG
ATCTGGGAGC AGGCCGCGAC GGCGGGCTCC GGCCGCTGA
 
Protein sequence
MNLVRRLAAG HVRGDYLDGI AVFSGIPYAA PLDGPARFAA PRLPERWTGT LDATRFSPSP 
PQTSWMGGSE SLWHPGDGTD CLSVNVWTPD PTGRGLPVLV WFYGGAFLIG SASQPEYDGA
TLARGGAVVV TVNYRVGFEG FGWLPDAPLN RGLLDQLAAL HWVRDNIAQF GGDPGNVTIM
GQSAGGTSVA VLVAADEGRG LFNRAIAQSV AGGFLTPERA RATSERIAAA LGVRATASDL
AAVRPEAIHA VQHEEGQITP YGPILGGELV PGLPWRRLRG EVDLVAGSTR DEYRLFAIAA
GVADADLAAT AVTVGLPPSA AGAYRAAHPD LSDADLNAMI LSDGAFRMPS LWCVGNHPGR
AYCYEFAWQS PAFAGALGAC HGIDTPLTFG NFVGTMSSML LGNPVPAGVV DLSEQMRSAW
ISFAATGDPG WPVYRAGKAI TRIWDVPSRL AADPQAVSRQ IWEQAATAGS GR