| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6791 |
|---|
| Symbol | |
|---|
| ID | 5675104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8272731 |
|---|
| End bp | 8274254 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641245640 |
|---|
| Product | catalase |
|---|
| Protein accession | YP_001511031 |
|---|
| Protein GI | 158318523 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTTC AGAAGCCTCG TCCGACGACG ACCGATGCCG GAATACCCGT CGCCAGCGAT
GAGCACTCGC TGTCCGTGGG GCCGGACGGC CCGCTGCTGC TGCAGGATCA CTACCTGATC
GAGCAGATGG CGAACTTCAA CCGGGAACGC ATCCCGGAGC GTCAGCCGCA CGCGAAGGGC
GGTGGCGCGT TCGGCACCTT CCAGGTCACC CAGGACATGA GCGCGTTCAC CCGGGCCGCG
GTGTTCCAGC CCGGTACCGA GACGGATGTG ATCATTCGGT TCTCGACGGT GGCCGGGGAG
CGCGGCAGCC CCGACACCTG GCGCGACCCA CGCGGTTTCG CGGTCAAGTT CTACACCAGC
GAGGGCAATC TCGACATCGT CGGGAACAAC ACGCCGGTCT TCTTCATCAG GGATCCGCTG
AAGTTCCAGC ACTTCATCCG GTCCCAGAAG CGCCGGGCCG ACAACAACCT GCGTGACCAC
GACATGCAGT GGGACTTCTG GACGCTGTCA CCGGAGTCCG CGCACCAGGT CACGTGGCTG
ATGGGTGACC GCGGCATTCC GCGCACCTGG CGACACATGA ACGGATACTC CAGCCACACG
TACATGTGGA TCAACGCCGC CGGCGAGCGG TTCTGGGTGA AGTACCACTT CAAGACCGAT
CAGGGCATCG AGTTCTTCAC CCAGGACGAG GGTGACCAGA TGGCCTCGGT AGACACCGAC
TACCACCAGC GCGACCTCTT CGAGCACATC GCCGCCGGGG ACTTCCCGAG CTGGACGCTG
AAGATGCAGA TCATGCCGTT CGAGGAGGCC AAGACCTACC GGTTCAACCC CTTCGACCTG
ACCAAGGTCT GGCCGCACGG CGACTACCCG CTGCACGAGG TCGGCCGGCT GACACTCAAC
CGCAACATCA CCGATTTTCA CACGGAGATG GAGCAGGCCG CGTTCGAGCC GAACAACATC
GTCGCGGGCA CCGGGCTGTC GCCGGACAAG ATGCTGCTCG CTCGCGGGTT CAGCTACGCC
GACGCCCACC GGGCCCGCCT TGGTGTGAAC TACAAGCAGA TCCCGGTGAA CTCCGCGAAG
GTGCCCGTCC ACAGCTACTC CAAGGACGGC GCGATGCGGG TGCAGAACGT CACCGACCCG
GTGTACGCGC CGAACTCCTA CAGCGGCCCG GTGGCCCAGC CGGAGCTGAC CGACGACGGC
GGCCACTGGT ACTCCGACGG CGAGATGGTT CGCGCCGCTT ACACCTCGCG CCCGGAGGAC
GACGACTGGG GGCAGGCCGG GACGATGGTC CGCGATGTCC TCGACGACGC CGCGCGGCAG
CGGCTGGTCG ACAACGTCGT CGGGCACCTG CTCGACGGTG TCAGCGAACC CGTGCTGGTC
CGCGCCTTCG AGTACTGGCG CAATGTCGAC AAGGACCTCG GCACCCGGAT CGAGGCAGAC
GTACGGGCCA AGCAGGACGA GACCGATCCG AAGGCCGCGC AGCAGGCCAA CCCGGCCCGG
TCCAGCGCGC AGGCCAAGGC CTGA
|
|---|
| Protein sequence | MTVQKPRPTT TDAGIPVASD EHSLSVGPDG PLLLQDHYLI EQMANFNRER IPERQPHAKG
GGAFGTFQVT QDMSAFTRAA VFQPGTETDV IIRFSTVAGE RGSPDTWRDP RGFAVKFYTS
EGNLDIVGNN TPVFFIRDPL KFQHFIRSQK RRADNNLRDH DMQWDFWTLS PESAHQVTWL
MGDRGIPRTW RHMNGYSSHT YMWINAAGER FWVKYHFKTD QGIEFFTQDE GDQMASVDTD
YHQRDLFEHI AAGDFPSWTL KMQIMPFEEA KTYRFNPFDL TKVWPHGDYP LHEVGRLTLN
RNITDFHTEM EQAAFEPNNI VAGTGLSPDK MLLARGFSYA DAHRARLGVN YKQIPVNSAK
VPVHSYSKDG AMRVQNVTDP VYAPNSYSGP VAQPELTDDG GHWYSDGEMV RAAYTSRPED
DDWGQAGTMV RDVLDDAARQ RLVDNVVGHL LDGVSEPVLV RAFEYWRNVD KDLGTRIEAD
VRAKQDETDP KAAQQANPAR SSAQAKA
|
|---|
| |