Gene Franean1_6786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6786 
Symbol 
ID5675099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8268879 
End bp8269772 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content74% 
IMG OID641245635 
Productalpha/beta hydrolase fold 
Protein accessionYP_001511026 
Protein GI158318518 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCTGG TGACCCGGAA GGCCCGAACG GCTGTCGCTC CACCTGGCAT GCGCCGTGCC 
CCAACCCCCG TCCCCGGGGC ACGGCGCCCA GAGCGAACGC GGCGAACGGC GGAGCCGACG
CGGACCGCCG CGCACGCCCT GCGGGAGACG ACGGTGATCG CCTCCGACGG GGTGTCCCTG
CATGTCGACG AGATCGGCCC GAGCGACGCG ACGCTGACCC TCGTCTTCGT GCACGGCTTC
TGCATGACCG CGGACGCCTG GTCCTCCCAG CGCCGGAATC TCGCCGACCT GGGACGCACG
GTCTGCTACG ACCAACGCGC GCACGGCCGG TCGGGCCCGT CCGACGCCGA GCACTGCACC
CTCGCGCAGC TCGCCGATGA CCTGCTCCGG GTCCTCGACG ACCGGGTGCC GACCGGCCCG
ATCGCGCTCA TCGGTCATTC GATGGGCGGG ATGACCATCC TCGGGCTGGC CGAGACACAC
CCGGAGCTGT TCGGCGACCG GATCGTCGCC GTGGCCCTGC TGTCCACGAG CGCGGGTGGG
CTGGCCCGGT CGGTACTCGG CCTCGGCCTG CCGGCCATGG TCGCCACCGC GGCACGCCGG
ACGCTGCCCG GTGTGGCCGC CGCGATGCGC CACTCCCCGT CGGTGCTGGA ACGGGCCCGG
TGGCGGGGCA GCGGCCTGTC GAGGGCGCTG GTCGAGGCCG TGCCGGCCGC CGAACTCTCC
GTCGAGGCAG GTGCCGGGCA CGCGGTGATC CTCGAACGCC CGAACGCGGT CAGTGCCCGC
CTACGCGAGC TGATCGACAG GGCGCTTCCG GGCCGCCGGG TGTGCCGGCG CCCAAGCCTG
CGTCCGATGA CGCGGACCCG GCGCATCCCC ACCGCCGGCG ATCGACAGCC CTGA
 
Protein sequence
MGLVTRKART AVAPPGMRRA PTPVPGARRP ERTRRTAEPT RTAAHALRET TVIASDGVSL 
HVDEIGPSDA TLTLVFVHGF CMTADAWSSQ RRNLADLGRT VCYDQRAHGR SGPSDAEHCT
LAQLADDLLR VLDDRVPTGP IALIGHSMGG MTILGLAETH PELFGDRIVA VALLSTSAGG
LARSVLGLGL PAMVATAARR TLPGVAAAMR HSPSVLERAR WRGSGLSRAL VEAVPAAELS
VEAGAGHAVI LERPNAVSAR LRELIDRALP GRRVCRRPSL RPMTRTRRIP TAGDRQP