Gene Franean1_6746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6746 
Symbol 
ID5675059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8204384 
End bp8204884 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID641245595 
Producthypothetical protein 
Protein accessionYP_001510986 
Protein GI158318478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.328892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGATTC CGGCGGCCCC GACGGCCCCG ATACGTCGAC GCCGTCTCGA TCCCACTGAC 
ATTCCCGCGA TGGAAAGGAT CGTCGGCGGA GGTCTGCATC CGGTCAGCCT CACCGACCCG
GAAAGCAGCC TCTACCTCCC CGCTCCAGGC CCGAAAACCC GGCCCCTCAA CGAGAGGGCG
ACCGCGCTGG CCGCGTTCCA CACCCGCCCG TTCCAGCCGC AGACATTCCT CCGGGGTGAC
GCAATCCTCA CCGGCCCCAC TCGTGAGGAC GGCCAGGACA CCGACACACC CGACGACCTG
ATCCGGCTCC TCGACGCCCC TCAATTCCGC GTCCGGACCA AGAGCCCCGG CGACCAACGG
TGGAGCAGCG GGGGCAATGT CCACCCCAGT CTGCGCCACG CCTATACCCA CACCTGCAAA
ACCGTCCTTC GGATACCGGT CGACGACAGG CCGCTCATCC GCATCGTCGC CGTCACCCCC
GGCGCAAGGC GCCGCCGGTG A
 
Protein sequence
MVIPAAPTAP IRRRRLDPTD IPAMERIVGG GLHPVSLTDP ESSLYLPAPG PKTRPLNERA 
TALAAFHTRP FQPQTFLRGD AILTGPTRED GQDTDTPDDL IRLLDAPQFR VRTKSPGDQR
WSSGGNVHPS LRHAYTHTCK TVLRIPVDDR PLIRIVAVTP GARRRR