Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6736 |
Symbol | |
ID | 5675049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8192612 |
End bp | 8193865 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641245585 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001510976 |
Protein GI | 158318468 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.328111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0394993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGGAC CAGCATCGCG GGGAAAGTCG TTTGAGATCC CCAAACAGCT GGTGTGGGAT GCCTGGCTGA AAGTGAAGGA AAACGGTGGG GCACCGGGGC CCGACGGAGT GACGGTCGAG CAGTTCGAGG CGAACGTGAA GGATCGCCTG TACGTGCTGT GGAACCGCAT GTCGTCGGGG TCGTACTTCC CCGGACCCGT CGGAGCGGTG GAGATCCCGA AGAAAGGTGT GAAAGGAGGA GCAAGAACCC TCGGCATTCC CAATGTAGTA GATCGCGTAG CGCAGACGGT GCTAAAGCTG GCTCTGGAGC CGAAGGTCGA GCCGGTGTTC CACCGGGACT CGTACGGCTA CAGACCAGGC CGTTCGCAGC GCCAGGCGCT CGAGGTCTGC CGGAAGCGGT GCTGGTCGCA CGACTGGGTC GTTGACTTGG ACGTGCGGAA GTTCTTCGAC ACCGTGCCGT GGGAAAAGCT GCTGAAGGCG GTGGCGTACC ACACGGACCA GAAATGGGTC CTGATGTACG TGGAACGCTG TCTGAAAGCG CCGACGAAGC ATGCCGACGG AACCCTGCAA GAGAGAACCA TGGGCACAGT CCAGGGTGGC CCATTCTCCC CGCTGGCGGC TAACATCTAT CTGCACTGGG GCCTTGACGC CTGGATGGCG CGCGAGTTCC CGACCGTTCC ATTCGAGCGG TGGGCGGACG ATGTTGTGTT TCACTGTGTG AGCCTGGAAC AGGCCAGGGA AGTGCGGGAC GCGGTGGTGG CAAGGCTTGT CGAAGTCGGG TTGGAAGCTC ACCCCGACAA GACCCGGATC GTGTACTGCA AGGACAGCAA CCGAGGTGGC GACTATGAAA ACACGTCGTT CACGTTCCTG TCGTATACCT TCAGGCCACG AGTGGCATGG AACGGCACCC AGAAGAAACG CTTCACCAGC TTCATCCCGG GTGCCGCGCC GGATCGGGTG GCCTCGTTCA GCCGCGAAAT GCGCGACCTG AGGCTGCACA GGCGAACGAA CCTGACACTG GATCAACTCG CCGCGGACAT CAACCCGAAA GTGGCGGGTT GGCTAGAATA TTTCACCATG TTCTACCCGA GCGTGGTGCT ACCCATCGGC ACGCGCATTG ACAGCCATCT CGTGCGCTGG GCGAGGAAGA AGTACAAACG GCTGACACGA AGTGAGCGTA GGGCGTGGGC ATGGCTCAAG GGAGTCCGGG AACGGTCCCC TGACCTGTTT GCGCACTGGG CGTTGCGGTA CTGA
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Protein sequence | MSGPASRGKS FEIPKQLVWD AWLKVKENGG APGPDGVTVE QFEANVKDRL YVLWNRMSSG SYFPGPVGAV EIPKKGVKGG ARTLGIPNVV DRVAQTVLKL ALEPKVEPVF HRDSYGYRPG RSQRQALEVC RKRCWSHDWV VDLDVRKFFD TVPWEKLLKA VAYHTDQKWV LMYVERCLKA PTKHADGTLQ ERTMGTVQGG PFSPLAANIY LHWGLDAWMA REFPTVPFER WADDVVFHCV SLEQAREVRD AVVARLVEVG LEAHPDKTRI VYCKDSNRGG DYENTSFTFL SYTFRPRVAW NGTQKKRFTS FIPGAAPDRV ASFSREMRDL RLHRRTNLTL DQLAADINPK VAGWLEYFTM FYPSVVLPIG TRIDSHLVRW ARKKYKRLTR SERRAWAWLK GVRERSPDLF AHWALRY
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