| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6731 |
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| Symbol | |
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| ID | 5675044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8186498 |
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| End bp | 8187424 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245580 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001510971 |
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| Protein GI | 158318463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)
[COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00865661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.270738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGGC TCGTCCTCGG ACTGTGCGCG CTGCTGCTCG CCGTACCGAT CCTCGCCGGC
GGCGTCGCGG CCGGACTCCT CGGCGGCGAG GCCGGCGGCG GCGAGCCGGC ATCCGCCGCG
GCCGCCGCGG GGGAGATCCC TGTCGACTAC CAGCGGCTCT ACGTCACCGC TGCGGCCACC
TGCCCGGGGC TGCCGTGGAC GGTGCTGGCC GCGGTCGGGA AAGTCGAGAC CGACCACGGG
CAGAACCCGG ACTGGACCTC GCTGGCCGGC GCCCAGGGGC CGATGCAGTT TCTGCCTACC
ACCTTCGCCG CCTATGGGGT CGACGGCGAC GCCGACGGCA GCACCGACAT CAACAATCCC
GCCGACGCTG TCTACTCCGC CGCCCATTAT CTGTGTGCCT CCGGCGCACA GAACGGCGCG
AATATTCCCG GGGCGCTCTA CACCTATAAT CATGATAATT CTTACGTGAC GCGGGTTCTC
ACCCAGGCCG ACGTTTACAC CACCTCCGAC CTCACCACCA GCAGCGGCCC GTCGGACGCG
GCGCTGACCG CGGTGGACTA CGCCACCGCG CAGATCGGCC TGCCGTATCT GTGGGGTGGG
GACGGCCCCG ATTATGGCGA GAAAGGCTTT GATTGTTCGG GGCTTACCCG GGCCGCCTAC
GCCGCCGCCG GAGTCACCAT CCCCCGCGTC GCGCAGGCCC AGTTCAACGC CGGACCACGA
CTACCCCCAG GGGCCCCACT GGAAATCGGA GACCTCGTAT TCTACGGCCC GTCCGACATT
GACATCACCC ACGTGGGAAT TTACCTTGGC AGCGGGGAAA TGGTGAACGC GCCCCGGCGC
GGGGCCCCGG TCCGGACCGA AACCTACGTC CGACCCAGCT ACCGCGGAGC CACCCGACCC
GTCCCCGCGT CGGCCGGCTT TCCCTGA
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| Protein sequence | MTRLVLGLCA LLLAVPILAG GVAAGLLGGE AGGGEPASAA AAAGEIPVDY QRLYVTAAAT
CPGLPWTVLA AVGKVETDHG QNPDWTSLAG AQGPMQFLPT TFAAYGVDGD ADGSTDINNP
ADAVYSAAHY LCASGAQNGA NIPGALYTYN HDNSYVTRVL TQADVYTTSD LTTSSGPSDA
ALTAVDYATA QIGLPYLWGG DGPDYGEKGF DCSGLTRAAY AAAGVTIPRV AQAQFNAGPR
LPPGAPLEIG DLVFYGPSDI DITHVGIYLG SGEMVNAPRR GAPVRTETYV RPSYRGATRP
VPASAGFP
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