Gene Franean1_6727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6727 
Symbol 
ID5675040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8179976 
End bp8180938 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content75% 
IMG OID641245576 
Producthypothetical protein 
Protein accessionYP_001510967 
Protein GI158318459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.741027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.997084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAA CATCCAGATT TGATAGGGTT CGGATTCCGT CCGATGTGGA TCGGCCGGAC 
CGGATCCTGG CCGGGTTGAC CGCCCGTCAG CTGACCCTGC TCGCCCCACC GCTCCTGCTC
GCCGTCGCGG TCTACTGGAC CGCGTCGCCG TATCTGCCGT TGCCGGTGGT GGCGGTGCTG
GTGGTGCCGC TGCTCGGCGG CGGCGCCGCG CTCGCACTCG GCCAGCGCGG CGGGGTGACC
GCCGACCGGT ACGCTGCCGC CGCCCTCGCC CATCACCGCG CCCCCAAGCT CCACCTCGCC
GCCCCCGAAG GGATCCCGGC GCAGCCCGGC TGGCTGCCCG ACATCCCCAC CGCCCGCCGC
CGCGCCCCGG TGCCGGCGAG GCCACTGGCC GCCGGGGTGG ATGCGGCCGG GGTGATCGAT
CTACGCGGCG CGGTCGGCGT CGTTGCCGAA GTCCAGGGCG TGAACCTCGC CCTCGCCGGC
GACAGCGACA CCAGCCGGAA GGTCGCCGGC TATGGGCGGA TGCTCAACGC CCTGTCCGGG
CGGATCCAGA TCACCGTCCG CGGCGTCCCG GTCCACCTCG ACCCGCACCG GCACCGTTTG
CGCAGCCTGG CGGATCAGAT GCCTCATCCG GCGCTGGCCG CCGCGGCCCG TGACCACGCC
AACTTCCTCG GCGACATCGC GGCGACCCGG CGGTTGCGGA GCCGGCAGAT CCTGCTCACC
GCCTATGAAC CCGTCCCCGC GCTGCGCGGC GGCCGGGATA CCGCCGCGGC GGTGGCGGCG
CGCCGCCTCG AGGAAGCCCT CGGTCTGCTG GCCGCCGCCG GGCTGCGGGG GCGGATCCTC
ACTGGCCCCG AGCTGACCGG CCTGCTCGCT TCGGCCGCCG ATCCCACCGG TCCGCCACCG
CCCGACCGTG TCACCGCATC AGGTCCGGTG CTCGGCCGTA CGCGGACCGG AGGCCGCCGA
TGA
 
Protein sequence
MPETSRFDRV RIPSDVDRPD RILAGLTARQ LTLLAPPLLL AVAVYWTASP YLPLPVVAVL 
VVPLLGGGAA LALGQRGGVT ADRYAAAALA HHRAPKLHLA APEGIPAQPG WLPDIPTARR
RAPVPARPLA AGVDAAGVID LRGAVGVVAE VQGVNLALAG DSDTSRKVAG YGRMLNALSG
RIQITVRGVP VHLDPHRHRL RSLADQMPHP ALAAAARDHA NFLGDIAATR RLRSRQILLT
AYEPVPALRG GRDTAAAVAA RRLEEALGLL AAAGLRGRIL TGPELTGLLA SAADPTGPPP
PDRVTASGPV LGRTRTGGRR