Gene Franean1_6722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6722 
Symbol 
ID5675035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8175418 
End bp8176296 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content72% 
IMG OID641245571 
Productputative RNA methylase 
Protein accessionYP_001510962 
Protein GI158318454 
COG category[L] Replication, recombination and repair 
COG ID[COG1041] Predicted DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.121582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACC GGCACACCCC TATTCCGCTC ACCGTCTGGG CGGTGTCGCA GACCCACCCC 
CGTTTCCAGC GGCTAAACCG CTACACCCCC GAATCCCTCG CGCACCCCGC CCGCATGCTG
CCCGCCCTCG CCCGCCACAT CATCACCACC TTCACCGAGC CGGGTGATCT CGTCGTGGAC
CCCATGTGCG GCATCGGAAC CACCCTCGTC GAAGCCGCGC ACCTCGGCCG CCGGGCCCTT
GGGGTCGAAT ACGAACCCCG CTGGGCCGGC ATCGGCCGCG CCAACGCCGC CCTCGCGCAT
ACCCAGGGCG CCACCGGGAC CATCCAGCTC ATCACCGGCG ACTCCCGCCA CCTCCCCGCA
CTTGCCCCCG AGAGTGCGCG CGGAAAAGCC TCGCTGGTTC TCACCTCACC GCCCTACGGG
AAAGCCACCC ACGGCACCGT CGATGCCGAC CGGGTGAACG GGGTCCGCAA ACGCGACTAC
ACCTACAGCA CCGGCCGGCC TGGCCGGGTC GGGAACCTCG CCGCCGCCGA CCTCACCGAC
CTTCTCACCG GATTCACTGA GATTCTCACC GGTGCCGCCG CGCTGTTGCG CCCCGGTGGA
ATCATCGCGA TCGCCGTGCG CCCCTACCGC CAGGATGGTG AGCTCATCGA CCTGCCCGGC
GCGATCCTGC ACAGCGCGCA GAGGGTCGGG CTCGTCCGCG CCGGGCGCGC CGCAGCCCTC
CTCGCGGGCC TGCGCGAGGG CCGCCTGGTC CCGCGCACGA CGTTCTTCGC CCTCCACAAC
GCCCGCACCG CCCACGCCGC CGGCACCCCC CTCCACATCA CAGCCCACGA GGACATCCTT
CTCCTGACAC CCCCGCCCGT AGCCCGTCCG CAGGCCTGA
 
Protein sequence
MADRHTPIPL TVWAVSQTHP RFQRLNRYTP ESLAHPARML PALARHIITT FTEPGDLVVD 
PMCGIGTTLV EAAHLGRRAL GVEYEPRWAG IGRANAALAH TQGATGTIQL ITGDSRHLPA
LAPESARGKA SLVLTSPPYG KATHGTVDAD RVNGVRKRDY TYSTGRPGRV GNLAAADLTD
LLTGFTEILT GAAALLRPGG IIAIAVRPYR QDGELIDLPG AILHSAQRVG LVRAGRAAAL
LAGLREGRLV PRTTFFALHN ARTAHAAGTP LHITAHEDIL LLTPPPVARP QA