| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6721 |
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| Symbol | |
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| ID | 5675792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8173310 |
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| End bp | 8174794 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641245570 |
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| Product | integrase family protein |
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| Protein accession | YP_001510961 |
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| Protein GI | 158318453 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.917048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGGGT CCATCTTCAA GAAATGCGGC TGCCGCGACC CTATGACGAA ACGGCAGCTA
GGAAGAGCGT GTCCGAAACT TCGCCGTTCG AACGGCGGCT GGCGAACCGA CCATGGAACC
TGGGCCTACC GCATCGACCT GCCGCCCCAC CCTGACGGTA GGCGCCGCCT CGTCAGCCGC
AGCGGATTCC CCACCCAGGC CGAAACGCGC GCAGAATGCG AACGTATCGA AGCCCTCATC
GCCATCCCCG ACGCAGGAGA CAACACCGGC CGCCAAAGCA TCGCCGACAT CATCGGCAAC
GCCATCAGCA CCAACAAGCC CCTCCCTGAC ATCGACGACG TCAAGAACCG ATACCGGCGC
AACGCGGACC TCAACCCCGA CATCACCATC AGCGCCTGGA TGGAACGCTG GCTCGCCAGT
AGAAAGAACA TCCGACCGAA AACCCGCCTG GGCTACGAAA GTTACATCAG AGTCCACATC
ACGCCAGCCA TCGGCTCCGT ACAGCTCACC AAACTCACCG TCTCCCACCT CGACGACATG
TTCACCGCCA TCGACAACAC CAACATCAGG ATCATCCAGG ACCTTCAATC CGACGATCCC
CGAATCCGAC GCGCAGCCCG CGGCAAAAGA CCCACAGGAC CCGCCACCCA GCAGCGCATC
CGAGAAGTAC TCCGCGCCGC AATCAACGAC GCCAACCGCC GAGGACTCAT GACCCACAAC
CCAGCCAAGT ACGTCGAACT CCGCTCCGGA AAACGACCCA AAGCACTCCT GTGGACAGAT
GAACGCGTCG CGCGTTGGCG AGAAACAGGC ACCAAACCCT CACCCGTCAT GGTCTGGACC
CCGACCCAGA CCGGGATGTT CCTCGACCAT GCCCACAGCG ACCCGCTCTA CCCCGTCTAC
CACCTCATCG CTTACCGAGG CCTCCGTCGC GGCGAATCCG TCGCTGTGCA CCTGGACGAC
ATCGACATCA CCGAGGCAAC CCTCACCATC CGCTGGCAGT TCGTCCAGAT CGGCTACGCC
ACCCAACTCG CAAAGCCGAA ATCCGACGCC GGGGACCGTG TCATCTCCCT CGACCCCGAC
ACCCTCGCCG TCCTGAAAGC CTGCAGAACC CGCCAACACA CGGCCCGACT CGCCGCCGGT
ACGGCCTGGC CGAACAACGG CCTCGCGTTC ACCCACCCCG ACGGCAGCCC CATCCACCCC
GAACATCTCA CCAACCGCTT CCAGACCCTG GTCCAGGAAG CCGACCTACC ACCCATCACC
ATCCATGGCC TGCGCCACGG CGCCGCCACC CTCGCCCTCG CCGCCGGAGC CGACCTCAAA
GCAGTCCAAG AGCTCCTCGG CCACTCCACC ATCATGCTCA CCGCCGACAC CTACACCCAG
ATCCTCCCCG ATCTCGCCGC CGAGATCGCC CGCAACACCG CCCGCCTCAT CCCCCGCACC
CGCAGCCCCC ACGACTACCC CCGACACCAC ACCACGACCG ACTAA
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| Protein sequence | MKGSIFKKCG CRDPMTKRQL GRACPKLRRS NGGWRTDHGT WAYRIDLPPH PDGRRRLVSR
SGFPTQAETR AECERIEALI AIPDAGDNTG RQSIADIIGN AISTNKPLPD IDDVKNRYRR
NADLNPDITI SAWMERWLAS RKNIRPKTRL GYESYIRVHI TPAIGSVQLT KLTVSHLDDM
FTAIDNTNIR IIQDLQSDDP RIRRAARGKR PTGPATQQRI REVLRAAIND ANRRGLMTHN
PAKYVELRSG KRPKALLWTD ERVARWRETG TKPSPVMVWT PTQTGMFLDH AHSDPLYPVY
HLIAYRGLRR GESVAVHLDD IDITEATLTI RWQFVQIGYA TQLAKPKSDA GDRVISLDPD
TLAVLKACRT RQHTARLAAG TAWPNNGLAF THPDGSPIHP EHLTNRFQTL VQEADLPPIT
IHGLRHGAAT LALAAGADLK AVQELLGHST IMLTADTYTQ ILPDLAAEIA RNTARLIPRT
RSPHDYPRHH TTTD
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