| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6710 |
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| Symbol | |
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| ID | 5675023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8151295 |
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| End bp | 8152545 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641245558 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001510950 |
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| Protein GI | 158318442 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.614277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCGGA GCGTGACTCT CGATCGGTGG CGGGATCGGT ACGCCCAGCG TGCCCAGGGG
ATGATCGCGA GCGAGGTTCG GGCGTTGTTC GCGGTGGCAT CCCGTCCCGA GATCGTGTCG
CTCGCCGGGG GGATGCCTCC GGTCGACGTC CTTCCGTTGG AGGCGGTCGC GGCGACGGTG
TCGGAGCTGG TGTTGAGCCG GGGTGCGGTG GCGCTTCAGT ACGGCTCGGC GCAGGGTGAT
CCGGGATTGC GGGCGCGGAT CTGTGACGTG ATGGCGATGG AGGGCATCAC CGACACCCAC
CCGGACAACG TGGTGGTGAC CGCCGGGTCG CAGCAGGCGC TGGACCTGCT CACCCGCGTG
TTCATCGACC CGGGCGACGT GGTCGTCACC GAGGGGCCGA CCTACGTCAC GGCGATCAAC
ACGTTCGCGG CCTACCAGGC GCGGATCGTG CACGTGCCGA TGGACGGCGA CGGCCTGTCG
CCGTCCGCGC TCGCGGAGAC GTTGAGCCGC CTGGCCGCCG AGGGTGCCCG GGTGAAGCTG
CTCTACACGG TGCCGACGTT TCAGAATCCC GGCGGGATCA CGCTGACCCC GCCACGGCGG
GCCGAGGTGA TCGAGCTGTG CCGCCGGGCG GGGGTACTCG TGGTCGAGGA CAACCCGTAC
GGGCTGCTGT CGTTCACAGG TGAGCCGGTG CGGGCGATGC GCGCCGACGC CCCGGATGAC
GTGGTGTATC TGGGTTCGTT CTCGAAGACG TTGGCGCCGG GGCTGCGGGT CGGGTGGGCG
CTGGCACCGC CTGCGGTGAC CGCCCGGCTG GTGTTGGCGG CGGAGTCGGC GATCCTGTCG
CAGTCGATGT TCACGCAGCT GGCCGTTGAG CGGTATCTGG CGACCCAGCC GTGGGCGGAG
CAGGTGAAGG CGTTCCGGGA GATGTACCGG GAGCGCCGCG ACGCCATGCT CGACGCCCTG
GACGAGGTGA TGCCGCCCGG TGCGAGCTGG ACCCGCCCTG ACGGGGGGTT TTTCGTCTGG
TTGACGCTGC CGGACGGGGT AAACACGAAG GCGATGTTGC CGCGGGCGAT CGCTGCCCGG
GTCGCCTACG TTCCCGGGAT CGGGTTCTAC GCCGACGGCT CGGGTGGTAC CAGCATGCGG
TTGTCGTACT GCTACCCGCC GCCGGAGCGT ATCCGCGAGG GGGTCGGCCG GTTGGGCGCG
GTCGTGCGGG ATGAGCTGGC CCTGCGTGAC ACCTTCGGTT CCCGTCCCTG A
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| Protein sequence | MSRSVTLDRW RDRYAQRAQG MIASEVRALF AVASRPEIVS LAGGMPPVDV LPLEAVAATV
SELVLSRGAV ALQYGSAQGD PGLRARICDV MAMEGITDTH PDNVVVTAGS QQALDLLTRV
FIDPGDVVVT EGPTYVTAIN TFAAYQARIV HVPMDGDGLS PSALAETLSR LAAEGARVKL
LYTVPTFQNP GGITLTPPRR AEVIELCRRA GVLVVEDNPY GLLSFTGEPV RAMRADAPDD
VVYLGSFSKT LAPGLRVGWA LAPPAVTARL VLAAESAILS QSMFTQLAVE RYLATQPWAE
QVKAFREMYR ERRDAMLDAL DEVMPPGASW TRPDGGFFVW LTLPDGVNTK AMLPRAIAAR
VAYVPGIGFY ADGSGGTSMR LSYCYPPPER IREGVGRLGA VVRDELALRD TFGSRP
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