| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6689 |
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| Symbol | |
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| ID | 5675002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8124439 |
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| End bp | 8125608 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245537 |
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| Product | extracellular HAF |
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| Protein accession | YP_001510929 |
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| Protein GI | 158318421 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR02913] probable extracellular repeat, HAF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGTG ACCGTCAACC AGTCGCGCGC TTCGCGGTGG TGGCCGCCGC TTCCTCGGGG
CCGGTCAACC TGAGCAACCC GACGTCAGCG GACGCCTCGG CCACCGCGGC GCGACCACCG
TGGCAGGCCC GCCCGGCCGC GACCGCCGTC ACCGGGCCAC CGGGCGTCCC AGGCCTCCTG
GTGTGTGGGA ACGCCAGTGG CCTGCTGGCC GGCCTCTGGC AGAGCGGCCG GGACCGGGTC
GACGGCTTCC TGTGGCAGGC CGACACGGTT CGCCGCCTTC CCGGGAGCAG CCGTCCGATC
GCCATGAGCT CTCTGGGCGT CGTGGTCGGC GAGATGATTG GCAGGCAGGG CCCGCAGGCA
TTCCGCTGGA GCTACGGCAT CCACTCCGCG CTTCCCTACC TGGGCGGCAC GGACATCCCG
GGAGGGCATT TCAGTATCGC CGTGAGCGTC AACGGCCTGG GCCTGGTCGC GGGCAGCAGC
AGCACCGACA GCGGCGATCG GCATGCCTGC CTGTGGCGGG AACACATCAG CGAGGACCTC
GGCACCCTTG GCGGCCCGGA GAGCTCCGCC GCCGCCGTCA ACGACCTCGG CCTGGTGGTC
GGTACGAGTC AGACGCGCAG CGGGGCCGAC CACGCGTTCG TGTGGTCCGA CCGCCGTATG
CATGACCTCG GCACCCTCGG TGGCACCTGG AGCAGGGCGT CCGGCGTGAA CAACGCCGGG
CTGGTCATCG GGAGCAGCGG CACGGCGGAC AACCGGACCC ACGCGTTCTG CTGGCAGAAC
GGAATAATGA CAGATCTCGG GACACTCGTT GGAGATGAGC ACAGCGAGGC CGTCGCGGTG
AACAATGCCG GCCAGGTGCT CGTGCGCAGC TACGGCGGGG GAGTTCGGGC ATTCCTCTGG
TCCGGCGGCG ACCTCACCGA GATCCACGGT TTCGGCGAGG GTTGGGTCGA CCCGGCCGGG
CTCAACGACT CCGGCGTGGT CTGCGGAACG GTCGAGCTCC CGACCGGGGA CGGGCATGCG
TTCCGCTGGC GGCACGGAGT GGTCACCGAT CTCGGGACCC TCGGCGGGAG GCAGAGCTCG
GCCAGTCACG TGACGGCCAG TGGAGTCGTT CTCGGTGAGG CGGTGAGCGT CTCGAGCCCC
GTCCCCCACG CCGCCTTCTG GACACCGTAG
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| Protein sequence | MVSDRQPVAR FAVVAAASSG PVNLSNPTSA DASATAARPP WQARPAATAV TGPPGVPGLL
VCGNASGLLA GLWQSGRDRV DGFLWQADTV RRLPGSSRPI AMSSLGVVVG EMIGRQGPQA
FRWSYGIHSA LPYLGGTDIP GGHFSIAVSV NGLGLVAGSS STDSGDRHAC LWREHISEDL
GTLGGPESSA AAVNDLGLVV GTSQTRSGAD HAFVWSDRRM HDLGTLGGTW SRASGVNNAG
LVIGSSGTAD NRTHAFCWQN GIMTDLGTLV GDEHSEAVAV NNAGQVLVRS YGGGVRAFLW
SGGDLTEIHG FGEGWVDPAG LNDSGVVCGT VELPTGDGHA FRWRHGVVTD LGTLGGRQSS
ASHVTASGVV LGEAVSVSSP VPHAAFWTP
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