| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6672 |
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| Symbol | |
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| ID | 5674987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8102830 |
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| End bp | 8105535 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245523 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001510915 |
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| Protein GI | 158318407 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.514873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.542159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGTCT CGGAGACGGT GTCTGTCCAG GCGCGGATCG CCGCGGAGCT GGGCGTGCGC
GAGGGGCAGG TGGCCTCGGC GATCGACCTG CTCGACGGCG GTGCGACAGT GCCGTTCATC
GCCCGGTACC GCAAGGAGGT GACCGGCGCC CTCGACGACG CGCAGCTGCG AACCCTGGAG
GAGCGGCTGC GGTACCTGCG GGAGCTGGCG GAGCGGCGGG CGGCGATCCT GGAGTCCATC
CGGAGCCAGG GCAAGCTGGA CGACGCCCTC GAGGCGCAGA TCATGGCCGC CGACACCAAG
GCCCGCCTCG AGGACATCTA CCTCCCCTAC AAGCCGAAGC GCCGGACGAA GGCGCAGATC
GCGCGTGAGG CCGGGCTGGA GCCGCTCGCG GACGCGCTGC TGGCCGACCG CTCGCTCGAC
CCCCGGGCGG AGGCGGAGCG CTACGTCGAC GCCGAGAAGG GCGTCGCGGA CGCCACGGCC
GCGCTCGAGG GCGCCCGCGC CATCCTGGTG GAGCGCTTCG CGGAGGACGC CGACCTGATC
GGTGCCCTGC GCGAGCAGAT GTGGTCCCGT GGTTATCTCG TCAGCCGGGT CCGCGAGGGC
AAGGAGTCCG ACGGCGCGAA GTTCGCCGAC TACTTCGACT TCGCCGAACC GTTCACGAAG
CTGCCGTCCC ACCGGATCCT CGCGATGTTC CGCGGTGAGA AGGAGGAGAT CCTCGACCTC
ACCCTGGAGC CGGACGCGCC CGCCGACCCG GCCGAGCCCC CGGCCCCCGG CCCCACCGAC
TACGAGCGGC GCATCGCCGA GCGTTTCGAC ATCGCCGACG CCGGCCGGCC GGCCGACCGC
TGGCTGCTCG ACGCGGTGCG CTGGGCCTGG CGGACGCGGG TCCTGGTCCA TCTCGGCGTC
GACCTCCGCA TGCGGCTGTG GACGTCCGCC GAGGACACCG CGGTGCGCGT GTTCGCGGCG
AACCTGCGTG ACCTGCTGCT CGCCGCCCCC GCCGGGCAGC GGCGCACCAT GGGCCTCGAC
CCGGGGTTCC GTACCGGCGT CAAGGTGGCG GTCGTCGACG CGACCGGGAA GGTCGTCGCC
ACCGACACGA TCTACCCGCA CGTCCCGGCC CGCCGCTGGG ACGACTCGGT GGCCTCGCTG
GCGCGGCTGT CCGCCGAGCA CGGCGTCGAG CTGATCGCCA TCGGCAACGG GACGGCCTCC
CGGGAGACCG ACAAGCTGGC CGACGACCTG ATCCGCCGGC ATCCCGAGCT GAAGCTGACC
AAGGTGATGG TGTCGGAGGC CGGTGCCTCC GTGTACTCCG CCTCCGCCTA CGCGTCCCAG
GAACTGCCTT CGATGGACGT CTCCCTGCGC GGCGCGGTGT CCATCGCGCG CCGCCTGCAG
GACCCGCTCG CCGAGCTCGT CAAGATCGAC CCCAAGTCGA TCGGGGTCGG GCAGTACCAG
CACGACCTGG CCGAGGCCAG GATGTCGTCC TCCCTGGACG CCGTCGTCGA GGACTGTGTG
AACGCGGTCG GGGTGGACGT CAACACCGCC TCGGCGCCGT TGCTCTCCCG GGTCTCCGGC
ATCAGCGGCG GGCTGGCCGA CAACATCGTC CGCCACCGTG ACAGCAACGG CCCGTTCCGG
TCGCGGACGG GGCTGCTGGA CGTGGCCCGG CTGGGCCCGA AGGCGTTCGA GCAGTGCGCC
GGCTTCCTGC GCATCACCGG CGGCGACGAC CCGCTGGACA GCTCCAGCGT GCACCCGGAG
TCCTACCCGG TAGTCCGGCG GATCCTGACG GTGACCGGTG GCGACCTGCG CGCGCTGATC
GGCGACACGA AGACACTGCG CTCGCTCAAG CCCACCGAGT TCGTCGACGA CACGGTCGGC
CTGCCGACGG TGACCGACAT CCTCGCCGAG CTGGAGAAGC CCGGCCGCGA CCCGCGGCCG
GCGTTCCGGA CGGCCGAGTT CACCGAGGGC GTCGAAACCC TCGCCGACCT GGTGCCGGGC
ATGATCCTCG AGGGCGTGGT GACCAACGTC GCCGCGTTCG GCGCCTTCGT CGACATCGGC
GTGCACCAGG ACGGCCTCGT CCACGTCTCG GCGATGTCGA AGAACTTCGT CAGCGACCCC
CGTGAGGTCG CCAAGCCCGG GGACATCGTG CGGGTGAAGG TCCTCGACGT CGACATCCCG
CGCAAGCGGA TCTCGCTCAC GCTGCGCCTC GACGACGAGC CGGGCGCGGC GGACGCCGGC
GGCGGGCAGA GCGGTCAGGG TGGCCAGGGC GGTGAGCGGC GCGCGGGCCG CGGCGGCCGC
GGCGGGCAGA ACCGCGGTGG CGCCGGTGGC GCCGGTGGCG CCGGCCGGAG CCAGGAGCGC
GACGGCGGGC AGCCCGCCGA CCAGCAGGGC GGCCGGCAGG CGGCAGCGGC CGGCGGCGGG
CAGCCGGCCG GCGGCCAGCC CGGAGGCGGG CGTGGCGGTC CGGGGCAGCG GGGCGGCCCC
GGCCAGCGCG GTGGTCCGGG CCAGCGCGGT GGCGGTGGCG GTGCGGGTCA GCGCGGCGGT
GCCGGTGGCG CGGGTGGCGG TCAGCGCGGT GGCGGCGGTG GCCAGCGCGG CGCCGGTCAC
CGCGGCGGGC GGACCGACGG GGCCATCGCC GACGCGCTGC GCCGCGCCGG TCTGGTGACC
GGCGACGAGG TCACCCTCGG CGGAAAGCAG GACGACAGCC GGGACAGCCG CCGCGGGCGC
CGATAG
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| Protein sequence | MSVSETVSVQ ARIAAELGVR EGQVASAIDL LDGGATVPFI ARYRKEVTGA LDDAQLRTLE
ERLRYLRELA ERRAAILESI RSQGKLDDAL EAQIMAADTK ARLEDIYLPY KPKRRTKAQI
AREAGLEPLA DALLADRSLD PRAEAERYVD AEKGVADATA ALEGARAILV ERFAEDADLI
GALREQMWSR GYLVSRVREG KESDGAKFAD YFDFAEPFTK LPSHRILAMF RGEKEEILDL
TLEPDAPADP AEPPAPGPTD YERRIAERFD IADAGRPADR WLLDAVRWAW RTRVLVHLGV
DLRMRLWTSA EDTAVRVFAA NLRDLLLAAP AGQRRTMGLD PGFRTGVKVA VVDATGKVVA
TDTIYPHVPA RRWDDSVASL ARLSAEHGVE LIAIGNGTAS RETDKLADDL IRRHPELKLT
KVMVSEAGAS VYSASAYASQ ELPSMDVSLR GAVSIARRLQ DPLAELVKID PKSIGVGQYQ
HDLAEARMSS SLDAVVEDCV NAVGVDVNTA SAPLLSRVSG ISGGLADNIV RHRDSNGPFR
SRTGLLDVAR LGPKAFEQCA GFLRITGGDD PLDSSSVHPE SYPVVRRILT VTGGDLRALI
GDTKTLRSLK PTEFVDDTVG LPTVTDILAE LEKPGRDPRP AFRTAEFTEG VETLADLVPG
MILEGVVTNV AAFGAFVDIG VHQDGLVHVS AMSKNFVSDP REVAKPGDIV RVKVLDVDIP
RKRISLTLRL DDEPGAADAG GGQSGQGGQG GERRAGRGGR GGQNRGGAGG AGGAGRSQER
DGGQPADQQG GRQAAAAGGG QPAGGQPGGG RGGPGQRGGP GQRGGPGQRG GGGGAGQRGG
AGGAGGGQRG GGGGQRGAGH RGGRTDGAIA DALRRAGLVT GDEVTLGGKQ DDSRDSRRGR
R
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