| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6653 |
|---|
| Symbol | |
|---|
| ID | 5674968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8080110 |
|---|
| End bp | 8081072 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641245504 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001510896 |
|---|
| Protein GI | 158318388 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC CGCCCGCCGC CGGCTCCCGC ACCGCGCCCG GCTCCCGCCC CACGCCCGGC
TCCGGCACGC CGTCCGGCGC CGCGCTCGGC TCCGGCGCCG CGCCTGGTCC GGCCGAGATC
CTCCCGGCCG AGATCGTCCC CGTTCCGCTG GCCGTGGATC TCGTGGTGCT CACCGTGCGC
GATGACACTC TCTGCGTCCT TCTGGTGCGG CGCGGGATCG AGCCGTTCGC GGGACGGTGG
GCTCTGCCCG GCGGGTTCGT CCGGCCCGAC GAGGATCTCG ACGCGGCCGC CGTCCGCGAG
CTGCGGGAGG AGACCGGCCT GGCGCGCTCC ACCGGCCATC TCGAACAGCT CGCGACCTAT
GCGGACCTGG ACCGCGACCC GCGCGGGCGG GTGGCCACGG TCGCGTACCT GGCGCTCGCG
CCCGACCTTC CGGTTCCCGT CGCCGGCACC GACGCGGCGG CCAGCCGGTG GTGGGCGGTC
ACCGACATCC CGCGAGCCGG CTCGGACGGC GACTCGGGCG CAAACGGTAC GGACGGCGGC
ACAGGCGAAG GCGCGGGGAG CGCGGACGGC GGCACAGGCG AAGGCGCGGG GAGCGCGGAC
GGCGGCGCAG GCGGGGACGG CCGCGCGGAC GGCGGGATGA CCGGGCTGGC CTTCGATCAC
GCCAGGATCC TGGCTGACGG GGTCGAACGT GCCCGTTCAA AGATCGAGTA CAGCCCGGTG
GCGACGGCGT TCTGCCCGCC CGAGTTCACC GTCGCGCAGC TTCGGCGGAT CTACGAGATC
GTCTGGGGAA CCCGGCTGGA CCCTCGCAAC TTCCACCGTA AGGTCACCCG CACGGCGGGC
TTCCTCGTCC CGACCGGACG GACCACAACG CGGGACGGCG GCCGTCCGGC CGAGCTCTTC
ACCCGCGGGG ACGCCCGCCT GCTGCATCCG GCGATGCTGC GGCCGGAACC CGGAGACCGC
TGA
|
|---|
| Protein sequence | MTTPPAAGSR TAPGSRPTPG SGTPSGAALG SGAAPGPAEI LPAEIVPVPL AVDLVVLTVR
DDTLCVLLVR RGIEPFAGRW ALPGGFVRPD EDLDAAAVRE LREETGLARS TGHLEQLATY
ADLDRDPRGR VATVAYLALA PDLPVPVAGT DAAASRWWAV TDIPRAGSDG DSGANGTDGG
TGEGAGSADG GTGEGAGSAD GGAGGDGRAD GGMTGLAFDH ARILADGVER ARSKIEYSPV
ATAFCPPEFT VAQLRRIYEI VWGTRLDPRN FHRKVTRTAG FLVPTGRTTT RDGGRPAELF
TRGDARLLHP AMLRPEPGDR
|
|---|
| |