Gene Franean1_6644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6644 
Symbol 
ID5674959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8073032 
End bp8073850 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content72% 
IMG OID641245495 
Productmethyltransferase type 11 
Protein accessionYP_001510887 
Protein GI158318379 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACC GCTACGACGA GACGCGGGGC GGGGCGGAAC GTGGCCGGAC CGTCGCCGCC 
GCGCTCGCTC CGCACCTGCT CGGCGAGACG CCCCCGGAAC GCGCGCGGCT GCTGGAGATC
GGCGTCGGTA CCGGTCTGGT CTCCGCCGCC TTCGTCGAAC TCGGCTGGTC CGTGGCCGGA
GTGGATCTCT CCGAGCGGAT GCTCGCCCGC GCCGCGGGAC GGCTGCCCGG CCGGATCCTG
CGCGCTGACG CGACAGCGAT CCCACTCCGC TCAGGCACCG TGGACGCCTG TGCCGCGGTG
CACGTGCTGC ACCTCGTCGG CGATCAGCCC GCAGTGCTGG CCGAGGTCGT CCGGGTGCTG
CGCCCGGGCG GCCGGTTCGG TTTCGTCGGG GCCGGGGCGC CCGACGGATC GGACATCTCC
GAGATCATCC AAGCAATGCA GGCCACGCTT GCCGACGGCG CGTCCCGTCG CGACGCGCCC
GACACCGTCA CCCGGCTCGC CGAGCAGGCC GGCCTGCGCC TGGTCGCCGA CCTCACCCTC
ACCGGCGCGG GACGTCCTTC GACCCCGCTG GAAGCCGCCC GGCAGATCGA GCTCCGGACA
TGGTCGACCT TCTGGGACGT CCCCGCGTCG AAATGGTCCA CGATCGTCGA ACCCGCGCTG
GACGCTCTTC GCGGTCTCCC GAACCCGATC GAGGCCCGGC CAGCCAGAAT CCGTACGCCT
TGCCTGATCT TCGAGAGCCA GTCTCCCGGG ACGCCGGCTC GCGCAAGACA AGTCAATTAC
CCTGGGCGGC GTTTCATCAT TGATCGGCGG GTCGGGTAA
 
Protein sequence
MADRYDETRG GAERGRTVAA ALAPHLLGET PPERARLLEI GVGTGLVSAA FVELGWSVAG 
VDLSERMLAR AAGRLPGRIL RADATAIPLR SGTVDACAAV HVLHLVGDQP AVLAEVVRVL
RPGGRFGFVG AGAPDGSDIS EIIQAMQATL ADGASRRDAP DTVTRLAEQA GLRLVADLTL
TGAGRPSTPL EAARQIELRT WSTFWDVPAS KWSTIVEPAL DALRGLPNPI EARPARIRTP
CLIFESQSPG TPARARQVNY PGRRFIIDRR VG