Gene Franean1_6641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6641 
Symbol 
ID5674956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8071226 
End bp8071660 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID641245492 
Producthypothetical protein 
Protein accessionYP_001510884 
Protein GI158318376 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA TCACGCGCCG CTCAATCACC GTGGGCCACC TGCGCATGCA CATCGCTGAG 
GCCGGTTCCG GGCCGCTGGT CATTCTTTTG CACGGCTTTC CCGAGTCGTC GTACTCGTGG
CGGCACCAGC TCACCGCGCT CGCCGACGCG GGCTTCTGCG CCGTCGCCCC GGACCAACGT
GGCTACGGGC GTACGGGTGG TCCGGCCGAT GTCTCGGCGT ACACGATCTG TTCAGTGTGC
CGAGTGGTGA TCGTCTATGT CACTGCGGTG GATGCCGGTG CGCTCGCTGA GCGCGGCCTG
ACTTGCCGGG CCGCTGTCGC GGAGCGTGAC CAGCGTCGCG TACTGCCACC GCGTCGCCCC
CGCCGCAGCG AGACGGGCGT TCGAGATCCG TTCCGCGTGC ACCGTGCCGC GGCCGAGGAG
CCGGCTGGCC AGTGA
 
Protein sequence
MADITRRSIT VGHLRMHIAE AGSGPLVILL HGFPESSYSW RHQLTALADA GFCAVAPDQR 
GYGRTGGPAD VSAYTICSVC RVVIVYVTAV DAGALAERGL TCRAAVAERD QRRVLPPRRP
RRSETGVRDP FRVHRAAAEE PAGQ