Gene Franean1_6640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6640 
Symbol 
ID5674955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8070188 
End bp8071159 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content72% 
IMG OID641245491 
Productepocide hydrolase domain-containing protein 
Protein accessionYP_001510883 
Protein GI158318375 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTGA CCAGAGTCAG GGAACTGGCC GACCACTGGC GCCACCGTTA CGACTGGCGT 
GCGGCGGAAG CCGAGCTGAA CAGTCATCCG CAGTTCGTCA CCGAGATCGA CGGCCAGCGG
ATCCACTTCC TCCACGTGCG CAGCCCGCGG CCGGACGCGC TCCCACTGGT GCTGACCCAC
GGCTGGCCGG GGTCCATCGT GGAGTTTCTC GATGTGATCG GGCCGCTTTC GGCGGACTTC
CACCTGGTCG TCCCGTCGAT TCCAGGGTGG GGCTTCTCCG GCCCGACGCG CGAGCGCGGC
TGGGATGTCG ATCGGGTGGC ACGTGCCTGG GCGGAGCTGA TGCGTGGCCT GGGATACCGC
CGGTACGGCG CGCAGGGCGG TGACTGGGGG GCGTCGGTGT CCCGGGCCCT GTCGCAGCAC
GACGCCGACC ACGTCGTCGG AATACACCTC AACTATCTTC CGACACCGCG GCTGCCGGGC
GACCCGGACC GCACCCGGCT GACACCGGGG GACCAGGAGC GGCTCGCCCA GACCGAGGCC
TACCTGCGCG ACCAGCCGGC GGTTCGGCTG GTCAACGGCA CCCGGCCGCA GACCCCGGCG
TACGCCCTCA ACGACTCGCC GGTCGGGCTG CTCGCCTGGC TGCTCGACCC GATGACGATG
TGGGCGGCCC GGGACTTCCC GATCAGTCCC GACCGGGTGA TCACGAACGT GACGCTGTTC
TGGTTGACCG GCACCGCCGG GACGGCGCCG CGCCTGCACC GGGAGACCGG CGGCCCGCGG
TCGTGGCGGA CCGTCCAACC GGTGGGCGTC CTCGTCCTGC CCGAGGACAT CACCCGCCCG
ATCCGGCCGT ATGCCGAGCG GCGGATGCCG ATCGCCCGGT GGACGGAGGC CGACCGTGGC
GGTCACTTCG CGGGACTTGA GGTGCCCGAG CTGCTCGCCG CCGACATCCG CGCGTTCTTC
CAGGGCCGGT GA
 
Protein sequence
MPLTRVRELA DHWRHRYDWR AAEAELNSHP QFVTEIDGQR IHFLHVRSPR PDALPLVLTH 
GWPGSIVEFL DVIGPLSADF HLVVPSIPGW GFSGPTRERG WDVDRVARAW AELMRGLGYR
RYGAQGGDWG ASVSRALSQH DADHVVGIHL NYLPTPRLPG DPDRTRLTPG DQERLAQTEA
YLRDQPAVRL VNGTRPQTPA YALNDSPVGL LAWLLDPMTM WAARDFPISP DRVITNVTLF
WLTGTAGTAP RLHRETGGPR SWRTVQPVGV LVLPEDITRP IRPYAERRMP IARWTEADRG
GHFAGLEVPE LLAADIRAFF QGR