| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6624 |
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| Symbol | |
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| ID | 5674939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8056687 |
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| End bp | 8057916 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245475 |
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| Product | RNA polymerase sigma 70 family subunit |
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| Protein accession | YP_001510867 |
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| Protein GI | 158318359 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCAG TTGAACCCCT CGGCGGGGGC CAGTGGCGCG AGCTCGCGCG ACAGGCCCTC
GCCCGGCTGC TGCGCAGCCA TGGCAGCGCC CAGTTCGACC TGTGCGAAGA CGCCGTCCAG
GAGGCGCTCC TGCAGGCGTA CCAACAGTGG CCGGCGCGGT TTCCGGACGA CCCGTTGGGC
TGGCTGATCG CTACCGCCCG CCGCCGGTAT GCCGACCGTG CCCGCACTGA CGCCCGGCGC
CGACACCGCG AGGCGCGCGT CGCGTCGTTG CAGGCTCCGG TGATGCCGGA GGCCGTTCAC
CGGGACGATT CGCTGCTGGT CCTCCAGCTG TGTTGCCACC CCGACCTGCC CCGCTCCGGA
CAGGTAGCGC TGACCCTCCG GGCGGTCGCC GGGCTGACCA CCGCCCAGAT CGCCAACGTC
TACCAGCTCC CCGAGCGCAC CATCGCCCAA CGGATCACCC GGGCCAAACG CCGCGTCAGC
GAACTCGGCC GGCCGCTGCC GCCGCCCGGA CACGCGGGCG AGGGCGTCAC TGCCGTACTC
GACGTGCTCT ACGTGATGTT CGCCGAGGCG CACCACACGA CCGCCGGAGC GCCTCCCCGC
GACGCGGGTC TCGCCGCCGA GGCGATTCGC CTGGCTCGGC TCCTTCGTCG CAGCGTCCCT
GAGTCCACCG AGACCACCGG GCTTCTCGCG CTGATGCTGC TCACCGAGGC CCGCCACCCA
GCCCGGGTGG CGCAGGACGG GCACCTGACG TCACTCGACG AGCAGGATCG GTCGCTGTGG
GACCAGGAGC TGATCAACGA AGGGATCGCG CTCGTCGAGC AAGCCGCCCG GGGTGCCGAA
CCCAGCCCTT ACCTGCTCCA GGCCTGCATC GCGGCTCTGC ATGCCGAAGC CCCCGACATC
GCGACAACCG ACTGGGACGA GATCCTCGCG CTCTACCGGC TTCTTGAGAT CGTTACCGGC
CACCAGAACC CCACGGTCAC CCTCAACAGC ATCGTCGCCC AGGCCATGGT CGACGGCATC
GATGTCGCCC TCGCCCGGAT CGACGCGCTG GAAGCCGACC ACCCTGGCCT TCCCCGCATC
GACTCCGTAC GCGCCCACCT CCTGGAGCGG GCCGGCAGGA CGGACGACGC GGCCGGGGCC
TACCGGCGAG CCATCGTCGG CACCGTCAGC CTCGCCGAGC AACGCCACCT CAGGCGACGT
CTACGCCGCC TGTCTGGCGC GCACGTGTGA
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| Protein sequence | MIPVEPLGGG QWRELARQAL ARLLRSHGSA QFDLCEDAVQ EALLQAYQQW PARFPDDPLG
WLIATARRRY ADRARTDARR RHREARVASL QAPVMPEAVH RDDSLLVLQL CCHPDLPRSG
QVALTLRAVA GLTTAQIANV YQLPERTIAQ RITRAKRRVS ELGRPLPPPG HAGEGVTAVL
DVLYVMFAEA HHTTAGAPPR DAGLAAEAIR LARLLRRSVP ESTETTGLLA LMLLTEARHP
ARVAQDGHLT SLDEQDRSLW DQELINEGIA LVEQAARGAE PSPYLLQACI AALHAEAPDI
ATTDWDEILA LYRLLEIVTG HQNPTVTLNS IVAQAMVDGI DVALARIDAL EADHPGLPRI
DSVRAHLLER AGRTDDAAGA YRRAIVGTVS LAEQRHLRRR LRRLSGAHV
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