Gene Franean1_6614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6614 
Symbol 
ID5674929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8047320 
End bp8048594 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content68% 
IMG OID641245465 
Producthypothetical protein 
Protein accessionYP_001510857 
Protein GI158318349 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGG TCGACTATCG GCGCCGTGTC CTCGACGGCA CACTGGACGC ACTTCAGCCG 
CATCTTCGCG CTCTGTCGAT CCACGGGCCG AAGGCAGTCG GCAAGACCGC GACCGCGATG
CGGCGTGCAG CGTCGATCAT CGATCTCAGC CTTCCCGGCC AGCGTGAGAT CGTGGCCGCC
GATCCGACCA TCCTGACTCG GCTGCCGGGG CCGGTCCTCG TCGACGAGTG GCAGCGCCTT
CCCGAGGTGT GGGACCACGT GCGGCGCGCG GTCGACGCCG GCGCGCCGGC CGGTCATTTC
ATCATCGCGG GCAGCTCCGC ACCGCGAGGG GCGGTGGTTC ACTCGGGCGC CGGGCGGATC
GTGCCCCTGC GGATGCGCCC GCTGAGCCTG GCCGAGCGAG ATGTCGACAG GCCGACTGTG
AGCCTCGCTG CGCTCCTCGA CGGAAACAGC GACATCGGCG GTGCCACCTC GCTTCGGCTG
ACGGACTACG TCGAAGAGAT CACGGCATCG GGCTTTCCCG CCCTCCGCGG CCTGCCGTCG
CGGGCGCGTC GGGCTGAACT GGACGCGTAT CTGGACAACG TCGTTCAACG GGAGTTCCCC
GAGCAGGGCT ACCCGATCCG GCGACCGACG GTGCTGCGCG CCTGGCTCGC CGCCTATGCC
GCCGCCACGT CGACGACGAC GGCCTACTCG AAAATCCTGG ATGCGGCGAC GCCCGGCCTA
GGCAACAAGC CAGCCAAGGA GACCACGCTC GCCTATCGTG ACGCCCTGTC GTCGCTGTGG
TTGCTCGACG CAGTACCACC GTGGATTCCC AGCCGAAACC ATCTCGAGCG GCTCGGCCGG
TCCCCCAAGC ACCACCTGGC GGACCCCGCG TTGGCCGCAC GGCTGCTCGG ACTCGACGAC
TCCGCGCTGC TGAGGGCCGA GCAGGGCAGC ACCGTCCTGT CGGCAGGCAC GATCCTCGGG
GCCCTGTTCG AGCACCTCGC CGCGCTCAGC CTCCATACCT ACGCCGAGGC CACCGAGGCC
CGGGTGGGCC ACCTGCGCAC CCAGAACAAC GACCACGAGG TCGATCTGAT AATCGAGCGC
TCGGACGGCC GCGTGCTGGC GGTCGAGGTA AAGCTGGCGG ACCGGGTCGA AGACTCCGAC
GTCAGACATC TGAACTGGCT ACGAGAACGC ATCGGAGAAG ATCTGATCGA TGCCCTCGTC
ATCTATGCGG GCGAGCACGC CTACCGCCGA CGTGATGATG TCGCCGTGGT CCCACTGGCA
CTGTTCGGTC CGTGA
 
Protein sequence
MDVVDYRRRV LDGTLDALQP HLRALSIHGP KAVGKTATAM RRAASIIDLS LPGQREIVAA 
DPTILTRLPG PVLVDEWQRL PEVWDHVRRA VDAGAPAGHF IIAGSSAPRG AVVHSGAGRI
VPLRMRPLSL AERDVDRPTV SLAALLDGNS DIGGATSLRL TDYVEEITAS GFPALRGLPS
RARRAELDAY LDNVVQREFP EQGYPIRRPT VLRAWLAAYA AATSTTTAYS KILDAATPGL
GNKPAKETTL AYRDALSSLW LLDAVPPWIP SRNHLERLGR SPKHHLADPA LAARLLGLDD
SALLRAEQGS TVLSAGTILG ALFEHLAALS LHTYAEATEA RVGHLRTQNN DHEVDLIIER
SDGRVLAVEV KLADRVEDSD VRHLNWLRER IGEDLIDALV IYAGEHAYRR RDDVAVVPLA
LFGP