Gene Franean1_6612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6612 
Symbol 
ID5674927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8045986 
End bp8046300 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content69% 
IMG OID641245463 
Producthypothetical protein 
Protein accessionYP_001510855 
Protein GI158318347 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTT ACGTCATCGT CGGAGTCGAC GTGCTCGACG AGGAGGCCAG CCTGGCCTAC 
GCCGCCGTGG CCCAGCCGTC CGTCCTCAGC CACGGCGGCC GTTACCTCGT GGCAGGCCCC
ACGCCCGAGC CCGTCGAGGG CACCTGGGAC TCCTCCCGGT TTCTGGTCAT CGAGTTTCCC
GACATGGATC GGATCCAGGA GTGGTACGAC TCCCCCGAGT ACCGGCGGGC CCGAGAGATG
CGGAAGAGCG CAGCTCGGGT GCGGATGCTG TTTGCCGAGG GCTCGCCGCC CGAGGGCTTC
TCCCTCCCGG CCTAG
 
Protein sequence
MSAYVIVGVD VLDEEASLAY AAVAQPSVLS HGGRYLVAGP TPEPVEGTWD SSRFLVIEFP 
DMDRIQEWYD SPEYRRAREM RKSAARVRML FAEGSPPEGF SLPA