Gene Franean1_6595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6595 
Symbol 
ID5674910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8025390 
End bp8025836 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content66% 
IMG OID641245446 
Producthistidine triad (HIT) protein 
Protein accessionYP_001510838 
Protein GI158318330 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATGCC AGGTAGACGA CAGCGAATGC GTGTTCTGCG CGATTGTCCA CCGTGGAACC 
GCCGCGAGCA TCATCCATGA GGACGACACC GCCCTGGCCT TCATGGATCA CCGGCCGGTA
ACGCCAGGGC ACCTCCTGGT CATACCGAAG GCACACGCCG TGGGGCTGGA GGATCTCGAC
GAGCGAGTGG GCACGCAGGT CTGGCTGGTC GCCCACCGAC TCGGCCGCGC ATTGCGTCGA
TCAGGCCTGC GGTGCGAAGG CGTCAACCTG TTCCTCGCTG ACGGCGAGGC CGCCTTCCAG
GAGATCTTCC ACGTCCACCT GCACGTTTTC CCGCGGTTCA CCGGTGACAG CTTCCGCCTG
GACGCGGACT GGCGCCTGCG CGATCGCGAC GAACTTGACA GGTCCGCCGA GGCGTTGCGC
CTCGGCATGT CCCGGCTCGA CTGTTGA
 
Protein sequence
MGCQVDDSEC VFCAIVHRGT AASIIHEDDT ALAFMDHRPV TPGHLLVIPK AHAVGLEDLD 
ERVGTQVWLV AHRLGRALRR SGLRCEGVNL FLADGEAAFQ EIFHVHLHVF PRFTGDSFRL
DADWRLRDRD ELDRSAEALR LGMSRLDC