Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6580 |
Symbol | |
ID | 5674895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8005680 |
End bp | 8007245 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245431 |
Product | cytochrome bd ubiquinol oxidase subunit I |
Protein accession | YP_001510823 |
Protein GI | 158318315 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCATG CCGCCGAAGT TCTCTCCCAC GTCGCGGCTC TCGCCCAGGC CGCGGACCCG CCCCAGGCGA GCTCCGTGTC CACCAACCTG GCCCGGGCGC AGACCGCGTT CTCGCTGGCG TTCCACATCT GCTTCGCGGT GTTCGGCGTC GGCATGCCAT GGCTCCTGCT GTTCGTCGAG GGGCGCTGGG TCCGCACCCG CGACCCCGTC TGGCTCGCGC TGACCCGCAA GTGGTCCAGG GCCTTCGCGG TCGTGTTCGC CGTCGGCGCC GTCTCCGGGA CGGCGCTGTC CTTCGAGTTC GGCCTGCTGT GGCCGGCCTT CATGGCCCGG TACGGCGGGG TGCTGGGACT GTCGTTCACG CTGGAGGGCT TCGCGTTCTT CGCCGAGGCG ATCTTCATCG GCATGTACCT GTACGGCTGG AAGCGCCTGT CGGCCCGGGC GCACTGGCTC ACGCTGTGGC CGATCGCCAT CGCCGGCACG TTCTCGACTC TCTTCATCAT CACGGCGAAC GCCTGGATGA ACACCCCCGG ACACGTCACA GAGGTCGACG GCAAGGTCGT ATCGGCAGAG CCGTTCGCCC CGTTCCTGGC TGCCACCGCG CCGCATCAGC TCATCCACAT GCTGCTGGCC GCGCTGATGT GCACCGGCGG CATCGTCGCC GGCGTGTACG CCGTCGGCAT GCTGCGCGGC CGGCGCGACG CGTATCACCA GCGGGGACTG CGCGTCGGTC TGGCCGTCCT GCTCGTCTGT GCCCCCCTGC AACTGATCGT CGGTGACTGG GCCGCCCGGG TGGTCGGCAA CGAGCAGCCG ATCAAGCTCG CCGCGATGGA GGGGCTCGGG CACACCCGCA CGCACGCCCC GCTGACCATC GGCGGGATCT ACGACGAGCA GACCGGCGAG GTCCGGCACG GCATCGAGGT CCCCGACCTG CTGTCGCTCA TGCAGGGGTT CAGCGCCGAT CACGAGATCA CCGGCCTGAC CGCCGTCCCG CCCGAGGAGC GGCCGAACGC CGTGCTGGTG CACTCGGCCT TCAACGTGAT GGTCGGCCTC GGGATGGCCC TGATCGCGTT GTCGCTGGTC ACCGGGGTCG TCGTCCTGCG CCGGCGGCGG CGCGGCGAGC GCCCGCTGCT GCCCACCGGA AAACCGTGGC TCTGGGCGGC CGCGGCCTCG GGACCGGCGT CCATGCTGGC GATGCTCGCT GGCTGGGAGG TCACCGAGGG CGGCCGCCAG CCCTGGATCG TCTACGGCCG GATGCGGGTG GATGAGGCCG TGACCAGCAG CTCGGGCATG CCGGCGATCT TCACTGGCAC GATCCTGCTC TACCTCGGCC TCGCGACGGC GCTCATCCTC ATCCTGCGCC GGATGGCGAC GGGTGGCCCT GAGCTGGCCG CCACCGTGGG GGAGACCTCC ACGACTCCGG ACATCCCGGA CGCGCGTCCC GCTCCCGCCT CTCCCGACAC TCCCGCGAGG GTCCGCGGTG ACGGCGACGG TGGCGACGGG CCCGGGACGT CCGCGCCCAC CACACCGCGA ACCGATCCGT CCAGCAGCGA AGGGGACGCC CGATGA
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Protein sequence | MVHAAEVLSH VAALAQAADP PQASSVSTNL ARAQTAFSLA FHICFAVFGV GMPWLLLFVE GRWVRTRDPV WLALTRKWSR AFAVVFAVGA VSGTALSFEF GLLWPAFMAR YGGVLGLSFT LEGFAFFAEA IFIGMYLYGW KRLSARAHWL TLWPIAIAGT FSTLFIITAN AWMNTPGHVT EVDGKVVSAE PFAPFLAATA PHQLIHMLLA ALMCTGGIVA GVYAVGMLRG RRDAYHQRGL RVGLAVLLVC APLQLIVGDW AARVVGNEQP IKLAAMEGLG HTRTHAPLTI GGIYDEQTGE VRHGIEVPDL LSLMQGFSAD HEITGLTAVP PEERPNAVLV HSAFNVMVGL GMALIALSLV TGVVVLRRRR RGERPLLPTG KPWLWAAAAS GPASMLAMLA GWEVTEGGRQ PWIVYGRMRV DEAVTSSSGM PAIFTGTILL YLGLATALIL ILRRMATGGP ELAATVGETS TTPDIPDARP APASPDTPAR VRGDGDGGDG PGTSAPTTPR TDPSSSEGDA R
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