Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6578 |
Symbol | |
ID | 5674893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8003748 |
End bp | 8004608 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641245429 |
Product | abortive infection protein |
Protein accession | YP_001510821 |
Protein GI | 158318313 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAGGG CCAGCATCGG CAGCGGCCGG GCCAGCGATT CCGACGGGCC AGCGGGCCCC ACCACCGGCC CCACCACCGG CGCCGGCACC GCCGGCAGCG AGCCGCTGGG TCGGCGGTCG CTGCACACCG AGGTCCTGCT CGTCCTCGGG GTGTCCTTCG GTGCCTCCGG CCTGTTCGCG CTCATCCGCT ACCTCGGGGT GCTGACCGCG CAGCAGTCGG TCCGCTCGCA GGTCGCGCGG CTCAACTCGT CCGCAGCGCC AGGGCGCCCC TGGCTCGATC TCGCGCTGCA GGCCGCCTCG CTCGCGACCG CGCTGGTACC GGTGTTTCTC GTCGTCCACC TGCTGGGCCG CCACGGCGGC GGGCCCGCGG TGATCGGCCT GGACCGGCGC CGTCCCCGCT CGGACGCCCT CCGTGGCGCG GCGCTGGCGG CGGCGGTCGG GGGCACCGGT CTCGCCTTCT ACCTGGTCGC CTGGCACAGC GGCGCCAATC TGACGGTCGC GCCGTCCAAC CTGCCGGACG TCTGGTGGCG GATCCCGGTC CTCGTCGCCT CGGCGGCCCA GAACGGTCTG GCCGAGGAGG TGGTGGTCGC CGGGTACCTG CTGGTGCGTC TGCGTGAGCT CGGGTGGGGC GACAATCGCG CGCTCGCCGC CAGCGCGCTG CTGCGCGGCT CCTACCACCT CTACCAGGGG CTGGGGGGAT TCGCCGGCAA TGTCGCGATG GGGCTGCTGT TCGGTCGGAT CTTCCAGCGG ACCGGCCGGG TGCTACCGCT CGTCATAGCA CACACACTCA TCGACACGGT CGCGTTCGTG GGGTATGTGA CGCTGGCCGG AAGGGTGTCG TGGATACCCG TTCCCCACTA G
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Protein sequence | MTRASIGSGR ASDSDGPAGP TTGPTTGAGT AGSEPLGRRS LHTEVLLVLG VSFGASGLFA LIRYLGVLTA QQSVRSQVAR LNSSAAPGRP WLDLALQAAS LATALVPVFL VVHLLGRHGG GPAVIGLDRR RPRSDALRGA ALAAAVGGTG LAFYLVAWHS GANLTVAPSN LPDVWWRIPV LVASAAQNGL AEEVVVAGYL LVRLRELGWG DNRALAASAL LRGSYHLYQG LGGFAGNVAM GLLFGRIFQR TGRVLPLVIA HTLIDTVAFV GYVTLAGRVS WIPVPH
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