| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6572 |
|---|
| Symbol | |
|---|
| ID | 5674887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7996375 |
|---|
| End bp | 7996959 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641245423 |
|---|
| Product | stress protein |
|---|
| Protein accession | YP_001510815 |
|---|
| Protein GI | 158318307 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCA GCCTTGCCAA GGGCGGCAAC GTCAGCCTCA CGAAGCAGGC CGCCGAGGCA
GGAACCGGAG CGCTGACCGC GCTCACCGTC GGGCTCGGGT GGGATGCCCG CACGACGACC
GGCACCGACT TCGATCTCGA CGCCTCCGCC ATCGGCGTGA AGAGCGACGG CAAGGCACTG
TCCGACGGGC ACTTCGTCTT CTTCAACAAC ATGAAGTCCC CGGAGGGCGC CATCACGCTC
TCCGGCGACA ACGTGACCGG CGCCGGCGAG GGCGACGACG AGTCCGTCAA CATCAACCTG
GGCCTGGTCC CGGCGGAGAT CGACAAGATC GTCGTGCCGG TCTCCATCTA CGACGCGGCG
AACCGGGCCC AGAACTTCGG CCAGGTCCGC AACGCCTACA TCCGCGTGGT GGACCAGACC
GGCACCGAGC TCGTCCGTTA CGACCTCTCC GAGGACTACT CGACCGAGAC GGTCGTCATC
TTCGGCGAGG TGTACCGCAA CGGAGCCGAC TGGAAGTTCC GCGCGGTCGG CCAGGGGCAC
AACGACCTCA GCGGCCTCGC CCGCGACCAC GGCGTCAACG TCTGA
|
|---|
| Protein sequence | MAISLAKGGN VSLTKQAAEA GTGALTALTV GLGWDARTTT GTDFDLDASA IGVKSDGKAL
SDGHFVFFNN MKSPEGAITL SGDNVTGAGE GDDESVNINL GLVPAEIDKI VVPVSIYDAA
NRAQNFGQVR NAYIRVVDQT GTELVRYDLS EDYSTETVVI FGEVYRNGAD WKFRAVGQGH
NDLSGLARDH GVNV
|
|---|
| |