| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6569 |
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| Symbol | |
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| ID | 5674884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7990714 |
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| End bp | 7993797 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641245420 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001510812 |
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| Protein GI | 158318304 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCCAT GGGACTCCTA TGATCGGTTC GTGCGCGTGC GCCTGCTGGG CCCGGTGGAC
GTGGTGGACG CCGCCGGGCT GCCGATCGCC ATCGGCAGCC CCACACAGCG GCTGCTGCTG
GCCATCCTCG GATCGCGCGT GGGGGACGTG GTGCCTCCCG CGCGTCTGGT CGATGCCGTG
TGGGGGGAGT CCCCGCCGCC GTCGGCCGAG GCGACGCTGC GCTCCTACAT CTCGAGGCTG
CGCCGGGTCC TCGGGGACGC GCTGCCGACC CATCCCGGCG GGTGGTCGCT GCGGCTCGCC
CCGGAACAGG TCGACATCGC CGTCTTCGAG CGTCTGCTGC GGCTGTCCGG GCAGGTCCAG
GACGCGTCCG CGCGGCTCGC CGCGTTGGAC GACGCGCTCG CCCTCTGGCG GGGCCCGGCC
TTCGGCGAGC TGACCGACGA CCCGGCGCTG CGACCGGTGG CGGTGCGCCT CGGCGAGGCT
CGCGGCGCGG CGCGCGAGTC CCGGGCCGCG CTGCTGCTGG CGGTCGGGCG CCCGGCCGAG
GCGGTCGGTG CCGCGGAGGA ACTGCTCGCC GAGTACCCGT GGCGGGAGGG CGCGTGGGGG
ACCCTCCTCG GGGCGCTGAG CGGTTCCGGG CGGGCTGTCG AGGCCGCGGA CGCCTACCGC
CGGGCGCACG CGGCCCTGGC GGAGGTGGGC CTCGAACCGG GCCCGGCGCT GCGCGCGGCC
CAGGCCGCGG CACTGTCCAC GGCAGCCCCC ACCGCCGCCC CCACGACAGT TCCCACGGCA
GCCCCCACCG TCGTCCCCAC AGCGGCCCCC GTGACGGCTC CCGTCCCTGA AAGGGCTGGG
CCGGCTGGGG TGGCGGGCTC GGGACGGCGC CGTCGGCCTC GCCGACCCGT CACGTCCCTG
CTGGGCCGGG AGGCTGACAC GGCCGCGGTC TGCGACCTGC TCGCGTCGGC CCGGCTGGTC
ACCATGTTCG GGCCGGGCGG GGTCGGCAAG ACGCGGCTGG CGCTGCACCT CGCCGACCGT
CTCGCGGACA GGTTCCCGCA CGGCGTCCTG ATGGTGGAGC TGGCGACCGT CGCCGACCCG
ACCGCCGTCC CCGCGTTCGT CGCGGACGCG CTGGGCATGC GCGGCGCCGA CGGCGACGCC
GGTGCCGCCC TCGAAGCCGC CGCCGAGCTT GACGCGCTCG TGATCCTGGA CAACTGCGAG
CACGTGGTGG CCGCGGCCGC CGCCGTCGCA TCGGCTCTGG TCGAGAACGG TCGCGGTGTG
CGCGTGCTGG CGACGAGCCG CGAGCTGCTC GGCGTGGACG GCGAGCACTG CTGGCCGGTA
CGCCCGCTGC GCGTCGACGG CCCGGACGCA CCCGCGCACG CCCTGTTCTG GGACCGCGTC
CGAGCCGCCT GCCCGGCGCC GGTTCCGGGG GCCGGACCGG CCTCGGACGG AGACCTCGAG
GCGGCCGACC GCATCGTCCG GAGGCTGGAC GGCCTGCCGC TCGGCATCGA GATGGCGGCC
GCGCGCAGTG GCACGATGTC CCTGCCCGAG CTCGCCGACC GGCTCGAGGA CCACCTCGGC
CTGCTCCGGG ACGTCCGCCG GGTGGGAACG CCGCGCCACC GCACGCTCGC CGACGTGGTC
GGCTGGTCGG TCTCGCTGCT GGACGCGCCG CACCGCGCGA TGCTGCGGAC CATGGGCGCG
TTCGCGGGCC CGGTGAGTCC CGCGGACGTC GCCGCGCTGG CGGGCCTGCC CGAACCGGAG
GCGCTGGATC TGCTCGACGC CCTGGTGGCC CGGTCGCTGG TGGTCGTCGA TCCGTCCCGG
GTACCGGCCC GCTACTCGCT CCTGGAGATC ATCCGCGAGT ACGCGCGACG GCAGCTCGGC
GCGTCCGACG CCGTGCTGCG TCAGGAACAC GCCCGGTACA TCCTCGCCGA GGTGCGGGCC
GCGGACGCCG TCCTGCGCAC CCCGCGGGAA GCGGCGGGGC ACAGCCGGAT CACCGACCTG
ATGGTCGAGG TCCGCGCTGC CCAGACATGG GCGCTGAGCG AAGATCCCCC GCTGGCCGTG
GAGATCGCGG CCGGCATGCA CGTGTTCGCG ATGACGCGGC TGCGGGTCGA GCCGTTGCAC
GCCGCGGTGG AACTCGTCCG CTCGCTCGGG CTGCACCCGC CGCCGGGCGG CGAGCCCCAC
CGGCTGGCGG ACCTGGTGTC GGATCTCGCC GCGGGCCTGC CACCCGGCGT GACGGCGGGG
GCCGCGGCGA CCACCCTGGC CACGGCGGCA TGCTGGTACG TCAGCGCCGG TGAGCTCGAG
CTCGCCGTGG CCTGTGCACA GCGCGGACGG CTGATCGCCG GTGACGCGCC CGAACGCCGG
TTCCCGCTCG AACTGCTCAG CGACACCGCC TCCTACCAGG GCCGGATCGG CGAGGCCGTC
GACCACGGCT GGGAGCTCGT CGCCGCGGCG CGGTCCTGCG CCGACCCGCA CGCCGAGGTG
GTCGGGCTGC TCAACGTGGC GATCGCGCAC GCCTACGCGG GGCACGCCGA GGACGGCCGG
GCCGCCCTCA GCCAGGCCCC CGCGGGGCCG CTCGCGCCGT CCGAGCTCGG CTGGCTGGCC
TACGGCGAGG CCGAGCTGAT CCTTGACCGC GACCCGGACC GCTGCCTGCG GCTGCTCGAC
CGCGCGGTCG CCCTGGCGGA TTCGGTCGAC AACCCCTACC TGGGCGGGGT GGCACGGGTG
TCCGCGGTGT CCGTCCGGGC CCGCTGCGGT GACCCGCAGC AGGCCGTCGA GGCTTTCGCG
CAGGTGCTGC GGCACTGGCG TGACCAGTAT GCGCTGACCC ACCTACTGAC CACGTTGCGT
AACCTCGTCG TGCTCTTCCA ACGCCTCGGC CGGCCGCGGC CGGCGGCCCG GCTGCTCGGC
GCCGTCACCT CGCAGGCGGT CAAGCCGAGC TACGGCGCGG AGGCCGCGAT GCTCGCGGGA
GCCGACAGCT GGGTGGACGA CGCCCTCGGC TTCGCCGCCG CCACCGCCGA ACGCGCCGCC
GGAGCCACCC GCACCGTCAT CGCCGCCACC GAGACAGCCC TCGACGACCT GGCTGACATC
ACCGCGGAGA TCCGCGGCGG CTGA
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| Protein sequence | MDPWDSYDRF VRVRLLGPVD VVDAAGLPIA IGSPTQRLLL AILGSRVGDV VPPARLVDAV
WGESPPPSAE ATLRSYISRL RRVLGDALPT HPGGWSLRLA PEQVDIAVFE RLLRLSGQVQ
DASARLAALD DALALWRGPA FGELTDDPAL RPVAVRLGEA RGAARESRAA LLLAVGRPAE
AVGAAEELLA EYPWREGAWG TLLGALSGSG RAVEAADAYR RAHAALAEVG LEPGPALRAA
QAAALSTAAP TAAPTTVPTA APTVVPTAAP VTAPVPERAG PAGVAGSGRR RRPRRPVTSL
LGREADTAAV CDLLASARLV TMFGPGGVGK TRLALHLADR LADRFPHGVL MVELATVADP
TAVPAFVADA LGMRGADGDA GAALEAAAEL DALVILDNCE HVVAAAAAVA SALVENGRGV
RVLATSRELL GVDGEHCWPV RPLRVDGPDA PAHALFWDRV RAACPAPVPG AGPASDGDLE
AADRIVRRLD GLPLGIEMAA ARSGTMSLPE LADRLEDHLG LLRDVRRVGT PRHRTLADVV
GWSVSLLDAP HRAMLRTMGA FAGPVSPADV AALAGLPEPE ALDLLDALVA RSLVVVDPSR
VPARYSLLEI IREYARRQLG ASDAVLRQEH ARYILAEVRA ADAVLRTPRE AAGHSRITDL
MVEVRAAQTW ALSEDPPLAV EIAAGMHVFA MTRLRVEPLH AAVELVRSLG LHPPPGGEPH
RLADLVSDLA AGLPPGVTAG AAATTLATAA CWYVSAGELE LAVACAQRGR LIAGDAPERR
FPLELLSDTA SYQGRIGEAV DHGWELVAAA RSCADPHAEV VGLLNVAIAH AYAGHAEDGR
AALSQAPAGP LAPSELGWLA YGEAELILDR DPDRCLRLLD RAVALADSVD NPYLGGVARV
SAVSVRARCG DPQQAVEAFA QVLRHWRDQY ALTHLLTTLR NLVVLFQRLG RPRPAARLLG
AVTSQAVKPS YGAEAAMLAG ADSWVDDALG FAAATAERAA GATRTVIAAT ETALDDLADI
TAEIRGG
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