Gene Franean1_6565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6565 
Symbol 
ID5674880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7987770 
End bp7988240 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content75% 
IMG OID641245416 
Producthypothetical protein 
Protein accessionYP_001510808 
Protein GI158318300 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.117283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATGT CGAACCCGCA GATCCCCGCT GGTGGCGGGG CCAACCTGGG GCAGATCCTC 
GAGCAGGCGC AGCGGATGCA GTCCGCCCTG TTCACCGCCC AGCAGGAGCT GGCCGAGGCC
CGGGTCGAAG GCTCGGCCGG TGGCGAGCTC GTCGTCGCGA CGGTGAACGG CGGTGGTGAG
CTGGTCGACC TCGTGATCAA GCCCGAGGCC GTGGACCCCG AGGACACCGA GACCCTCGCC
GATCTCATCC TCGCGGCGGT GCGTGACGCC ACCACCAACG CGCACCGGCT CGCGGCCGAG
AAGATGAACG CGGCGACCGG CGGTCTCGGT GGCGCGCTCG GCGGTCTCGG TGGCGCCGTC
GGAGGGCTCG GCGGGCCGGG CGGTGGCGCG GTCGGCGGTG GTCCCGGCGC GGCCGGGGCA
CTGCCGGGTG GCGGGGCGCT GGGCGGCCTG GGTATTCCCG GGCTCGGCTG A
 
Protein sequence
MVMSNPQIPA GGGANLGQIL EQAQRMQSAL FTAQQELAEA RVEGSAGGEL VVATVNGGGE 
LVDLVIKPEA VDPEDTETLA DLILAAVRDA TTNAHRLAAE KMNAATGGLG GALGGLGGAV
GGLGGPGGGA VGGGPGAAGA LPGGGALGGL GIPGLG