| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6560 |
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| Symbol | |
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| ID | 5674875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7979788 |
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| End bp | 7980561 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641245409 |
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| Product | glucose-1-phosphate cytidylyltransferase |
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| Protein accession | YP_001510803 |
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| Protein GI | 158318295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCG GAATTCTGGC CGGCGGTTTG GGAAGCCGGT TGGCGGAAGA GACTGTCATC
AAGCCCAAGC CAATGATCGA AATCGGCAAC CACCCGATCA TCTGGCACAT CATGAAGCAT
TACGCCCACT ATAAGATCAC CGACTTCACC GTCGCCCTGG GTTACAAGGG AGAGCACATC
AAGCGCTGGC TGGTCGACTA CGCCGCGCTC ACCAGCGACC TCACGGTCGA ACTCCGGCAC
GGGCAGGTCC ACCGGCACGC GAGCAGTCCT GAGGACTGGC GGGTCAACCT CGTCGACACC
GGCCAGGATA CGGCCACCGG CGGCCGTATC CTGCGGCTCG AGCGCTGGCT CGGCGACTCC
GGGACGTTCA TGTTGACCTG GGGGGACGGC GTCTCCAACC TCGACCTCGA CGCGCTGCTC
GCGTTTCACC GTGGCCATGG GAAGATCGCC ACTCTGACCG CCGTCCGGCC ACCGGCCCGC
TTCGGTCGCC TGGAGCTGGA GGGTGACCGG GTCTCGGAGT TCTCCGAGAA ACCTCAGGCC
GGCGAGGGCT GGATCAACGG CGCCTTCTTC GTGCTGGAGC CGCAGGTTTT CAACTATATC
GCCGGCGACG CCACGCAGTT CGAGAAGGAG CCCCTCGAGC TGCTCGCCAA GGACGGCGAG
CTGATGGCAT ACCGCCACAG CGGATTCTGG CAGTGCATGG ACACGGTACG CGACCGAAAA
CTCCTACAGT CGCTGTGGGA CACCGGCGAC GCGCCATGGA AGGTGTGGGA CTGA
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| Protein sequence | MKVGILAGGL GSRLAEETVI KPKPMIEIGN HPIIWHIMKH YAHYKITDFT VALGYKGEHI
KRWLVDYAAL TSDLTVELRH GQVHRHASSP EDWRVNLVDT GQDTATGGRI LRLERWLGDS
GTFMLTWGDG VSNLDLDALL AFHRGHGKIA TLTAVRPPAR FGRLELEGDR VSEFSEKPQA
GEGWINGAFF VLEPQVFNYI AGDATQFEKE PLELLAKDGE LMAYRHSGFW QCMDTVRDRK
LLQSLWDTGD APWKVWD
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