Gene Franean1_6559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6559 
Symbol 
ID5674874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7978823 
End bp7979530 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID641245408 
Producthypothetical protein 
Protein accessionYP_001510802 
Protein GI158318294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATACA GCCCGCAGGT CCCCACCCGG CGGGCAGCCG AGCGCGACGA GCGCAAGGTC 
GATGCCTGCG AGCCGAGACC TGCGCGAAGG TACGAGGCTG GCGGCGGCGA CCAGCTCGTG
GATCGTCATC GAAGACGAGG CGGGCCAGAG CCTGCGCCCA TCCAAGGCCC GGACCTGGGC
TCCGCGGGAC ACCCCCGACC GTGCAGGTAT CCGGGAAGGG CTCGGGACGG GTATCGGTGG
CAGCCCTTGG TCTGCCACCG GCTCGACGGC CGGCCCCGGC TGTTCTACCG GGTACAAGCC
CACCACGGCC GTCGTGGTGA GCGCCACAGC TTCTCCGAGG ACGACTACGC AACGCTGATC
GTCGCCGCGC ACCACCGGCT CCACACCCCG ATGCTGGGAA AACCTCAACA CCCACCCGAC
TGGCTGACAG TGGTGCGCCT ACCCGCCTAC GCCCCCGACC TCGACCCGGT CGAAGGGGTC
TGGGCGCACG TCAACGCGAT CTGGGCAACC ACACCCACGC CACCGTCGAC CAACCCACCA
CCTTTCCCTT CTGCGCTCGT GGCGCACTTA AACGACAAGC TTAAGCCGCG GGGTCGCCAG
GATCTCATCG GCGGTGTTGG TCCGGACGAA CGGTTTCGGG TCCTTGTTCC AGGTGTTGAT
CCACCGGCAG ATATCGGCTT CGCCCGGCTG CCGACCGACG GTACCTAA
 
Protein sequence
MGYSPQVPTR RAAERDERKV DACEPRPARR YEAGGGDQLV DRHRRRGGPE PAPIQGPDLG 
SAGHPRPCRY PGRARDGYRW QPLVCHRLDG RPRLFYRVQA HHGRRGERHS FSEDDYATLI
VAAHHRLHTP MLGKPQHPPD WLTVVRLPAY APDLDPVEGV WAHVNAIWAT TPTPPSTNPP
PFPSALVAHL NDKLKPRGRQ DLIGGVGPDE RFRVLVPGVD PPADIGFARL PTDGT