| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6555 |
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| Symbol | |
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| ID | 5674870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7972968 |
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| End bp | 7974209 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245404 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001510798 |
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| Protein GI | 158318290 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.381566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC CTTTCGATCC TGGCCTGGTA AAAGGCTCAT CCGTGGCGCT CGCGGCTTAC
CAGGGGGAGT CGGAAATGGA CGTAGTGACG GTTTGTCGAA CGGTTTTTCG CCGGTGGTAC
GTGGTTGTTC CGGTCCTGGT TGCCACCGTG GTCGTGCTCT GGGTCACAAC GTCCAAGGCA
GAACCGGTCT ACCAGGCCGA GGCCCAGGCC ATCGTCGTCG GACCGTCGGT GGAACAGAAC
GGTGAAATCG TACAGCCAGT CAACCCGCTG TCCTATTTCA ACGACTCTCT CAAACTGCTC
ACACTGACCA TATCGAGGAT CATCAACGGC GAGCAGGCGC GGGACGGGAT CAGGGCGGCG
GGCTTCCGCG CGGATTACAC GGTGACGGCG CCACCGGAAA CGACATTCCT AGAGATCACC
GCGACCGATC CCGATCCCGC CGAGGCCACT CGCACAGCGG CGCAGGTACT GGACCAGATC
ACCGCCAACA CGAACGAACT ACAGATGTCG GTGCCGGCGG GTCTGCGTTA TGAGGTTCAG
CGACTGTTCC AACCGGTGCG CACGAGCAAC GAGCCTGGGC GCAGCCTCCA GTTGCTGGCG
ACCATCGCGG TCCTGGGAGC GCTGGCCGCG TTGGGGCTGG CACTGTCCGT CGACGCCGCG
GCCAGGCGAC GGGCCCGATC GCGCCGGGAG CGACCCCGGT CACACCGCGG CGCCTGGTCG
CGCCGGGATC CAAAGCGGAC CGGCGGACGT CGACACCTGG CCGGGTCGCC GAAGGCGGTG
TGGCCTGAGC CGGCGGTGTG GCCTGAGCCG GCGGTGCAGT CTGAGCCGGC GGTGCAGTCT
GAGCCGGCGG TGCAGTCTGA GCCGGCGGTG TGGCCTGAGC CGGCGGTGCA GTCTGAGCCG
GCGGTGCAGT CTGAGCCGGC GGTGCAGTCT GAGCCGGCGG TGCAGTCTGA GCCGGCGGTG
CAGTCTGAGC CGGCAAAGGC ACCGCCGGTA CCCGCCCAGG CCGCACCGGT GCCGGCCGGG
CAGCCCGCGG CCACGCCGAT GCCGTCCAAG GCCCCGAAGA CGGCCGCGCC GTCGGTGCCC
GCCCAGATGG CACGGGAAGA AGCCGGTGAG CGGTCCTGGT CCCGCGAAGG GGCCGGCGGA
TGGTCCTTCG CCGTAGCGTC CTTCGACGGA GCGTCCGACG ACGGAACTGG CGGGTGGTCC
TTCGACGGAG TCGGCAAGAG GCGGCCGGGG GCAGGCCTGT GA
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| Protein sequence | MTEPFDPGLV KGSSVALAAY QGESEMDVVT VCRTVFRRWY VVVPVLVATV VVLWVTTSKA
EPVYQAEAQA IVVGPSVEQN GEIVQPVNPL SYFNDSLKLL TLTISRIING EQARDGIRAA
GFRADYTVTA PPETTFLEIT ATDPDPAEAT RTAAQVLDQI TANTNELQMS VPAGLRYEVQ
RLFQPVRTSN EPGRSLQLLA TIAVLGALAA LGLALSVDAA ARRRARSRRE RPRSHRGAWS
RRDPKRTGGR RHLAGSPKAV WPEPAVWPEP AVQSEPAVQS EPAVQSEPAV WPEPAVQSEP
AVQSEPAVQS EPAVQSEPAV QSEPAKAPPV PAQAAPVPAG QPAATPMPSK APKTAAPSVP
AQMAREEAGE RSWSREGAGG WSFAVASFDG ASDDGTGGWS FDGVGKRRPG AGL
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