| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6553 |
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| Symbol | |
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| ID | 5674868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7969907 |
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| End bp | 7971361 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641245402 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001510796 |
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| Protein GI | 158318288 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.413404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGCG GCGCCCGGTG GATGACGGTG GACCAGATCA CCGTCCAGGT CTCCCGTCTC
CTGGTCCAGA TTGTCCTTGC CCGGCTACTC GAACCGCGGG CATTCGGGTT GATGACGATG
GCTCTGGTCG TCGTGATGTT CCTCGAGATC ATGCGCGGTT TCGGGACCGG TATGGCGATA
GTGCAACGCG CCGAGATCAA CCAGCGCCTA CTCAACAGCG TCTTCTTTCT CAACATCGGG
CTCGGTGTCG CGGTCTCGGT GTTCCTGGCA TTGCTGGCAC CGGGCGTGTC GGCACTGTAC
GGCGACGCCG CGCTGACGCC GGTGCTCCAG GTTCTCGGCC TCGGCCTGCT GTTCGCCAGT
ATCGGCGACC TGCAACAGTG GCTGCTGCGC CGGGAGATGA AGTTCGGTGC GGTTGCCGCG
GCTGACATCA TCGGTACGAC TGTCAATGGT GTCTGCTCGA TCCTGCTCGG CGTGCTGGGT
TTCCAGGTGT GGTCGCTGGT CGTCGGCTAC GTGGTCGGCT TCGGAGTCAC CTCGCTGGTC
GCGTGGATGC TGTCGCCATG GCGTCCACAG GCGTCATTCA GCCTGTCCGA CCTGCGATCT
CTGCTGGGAT TCAGCGCCAA CCTGAGCGCT TTCCGCATTT TCAATTTCCT ACTGCTGCAC
GGCGACAAAG TAATCGTCGG CCGTTTCCTC GGGGCCGCTT CGCTGGGTTT CTACGGGCTG
GGGCAGCGGG TGCTGATGTA TCCGGTCAGC TCGGTCTCCA CTGCACTTCA GGAAGTCATG
TTCGCTGGCC TGTCCCGACT CCAGCATGAC CATGCCGCGA TCCGCCGGGT CTATTTCCGG
TCGTGTGCGG TGACCGCGTT GGTCTGTTTT CCGGTCATGG CCGGGCTGGC GGTCGTAGCG
CCGGATCTCG TCATGGTAGC ACTCGGCGAG CGTTGGGAGC CGATGGTCAC ACTCATCCGG
ATACTCGCGC CGATCGGAGG CATCCAGTCG GTGAGTTTCG GCGTCGGTGT CCTCTATAAC
GCCACCGGGC GTACCGACCT GCTGCTGCGC TGGGGAATGG TCTCCGGACC GTTGATGATC
GCCAGCTATT TCGCCGGCCT TCCGTGGGGC ATCAACGGTG TGGCTGCGGC CTACGCTATT
ATGATCGTGC TGCTGCTGCC ACCTGGTTTC GCGATTCCCT TCCGGCTGGT GGACGCCAGG
CTGCGGGAGT TGGTTGCAGC GATCTGGCCA CACCTCATGG CGACCGGGGT GACCGTGGCC
GCCATGACCG CCGTCCAGTG GTTGAGCCAT GGAATGGATC TGCCCCGCCC GATCTGCCTG
ACATCCAGCG TCCTGGCGGG CGCCGCGAGC TACGTCGGTG TCACCTGGAT ACAACGCCCA
CCCGCATTGG CGGACCTGCT GATGTTCGTG CGGCGAGGCG AACCCCGTGT CGGGACGGCC
GACCAGGTCG CGTAA
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| Protein sequence | MVRGARWMTV DQITVQVSRL LVQIVLARLL EPRAFGLMTM ALVVVMFLEI MRGFGTGMAI
VQRAEINQRL LNSVFFLNIG LGVAVSVFLA LLAPGVSALY GDAALTPVLQ VLGLGLLFAS
IGDLQQWLLR REMKFGAVAA ADIIGTTVNG VCSILLGVLG FQVWSLVVGY VVGFGVTSLV
AWMLSPWRPQ ASFSLSDLRS LLGFSANLSA FRIFNFLLLH GDKVIVGRFL GAASLGFYGL
GQRVLMYPVS SVSTALQEVM FAGLSRLQHD HAAIRRVYFR SCAVTALVCF PVMAGLAVVA
PDLVMVALGE RWEPMVTLIR ILAPIGGIQS VSFGVGVLYN ATGRTDLLLR WGMVSGPLMI
ASYFAGLPWG INGVAAAYAI MIVLLLPPGF AIPFRLVDAR LRELVAAIWP HLMATGVTVA
AMTAVQWLSH GMDLPRPICL TSSVLAGAAS YVGVTWIQRP PALADLLMFV RRGEPRVGTA
DQVA
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