Gene Franean1_6551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6551 
Symbol 
ID5674866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7967596 
End bp7968507 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID641245400 
Productparallel beta-helix repeat-containing protein 
Protein accessionYP_001510794 
Protein GI158318286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.247532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAC TTGGACCGAC CATCCGGCGC CGGTACGTCC TCATCGCGCT CGTGGCGGCG 
GTGGTCGCGG CCGGTGGAAT CCTGATCGTC GTCACCGTTG CGAGCGATGG TTCGGACCCG
ACAGCAGGCG GGCCCTCGCC AGCCGGTACC GGGACCGCCG TTGCGCCGCC GGTCGGTCCG
TCCACGGCCC ACGGGTGCGG GAGCAGGCCG GACGACTCGA ACACCGGCCC ACCCGCGGGC
ACCCACCTCG GGCGAACGGC GGACGTAACC CTCCGGACCG CTGGCCAGCT ACTCGTCAAC
AAGGAGTTCT TCGGCCTGGT CGACATCTAC GCCGACAATG TCACCATCAG GAACTCGGTC
GTCCACGGCA GTATCCGGAT ACGCGGGAAT AACGCCGTGA TAGACCATGT GGCGGCCGCC
GGGATCGCAA TCCGTGGCGG CTCCGGTCAT GTCGTTCAGT ACACTGATGT CTCCGGCGGA
GATGACGGAT TTCATATCGA TTCCAAATAT CAGCCGGTTT CACGGGTACT CATACGCAAC
AACTACGTAC ACGATCCTTC CCCACCGCCC GATGCTCATG TCGACGGCGT CCAGGTTCGC
GGCGTACGGA ACCTGAGCCT GCTGTGTAAC AACTTCGACC TGACGCCGTA CCAGCGGACC
CAGAATGGCG TCATATATCT TGAGTGGGCG AGCGGTGGAA ACTATGACGT GATCGTCGAC
CGTAACTGGC TGAACGGCGG CGGCAGTACG CTGTTTGTCG CCGCGACGAA TCTCCGGGTG
ACGCGGAACC GCTTCGGCCG TGATTTCCGC TGGAGCGTCT GCCGGCTCGG CGACAACGAG
AGATCATTTT TCAGTGCTGG AAACGTCTGG GATGACACCG GCACACCGGT AAAGCTGTGC
GACCAGGAAT AG
 
Protein sequence
MARLGPTIRR RYVLIALVAA VVAAGGILIV VTVASDGSDP TAGGPSPAGT GTAVAPPVGP 
STAHGCGSRP DDSNTGPPAG THLGRTADVT LRTAGQLLVN KEFFGLVDIY ADNVTIRNSV
VHGSIRIRGN NAVIDHVAAA GIAIRGGSGH VVQYTDVSGG DDGFHIDSKY QPVSRVLIRN
NYVHDPSPPP DAHVDGVQVR GVRNLSLLCN NFDLTPYQRT QNGVIYLEWA SGGNYDVIVD
RNWLNGGGST LFVAATNLRV TRNRFGRDFR WSVCRLGDNE RSFFSAGNVW DDTGTPVKLC
DQE