| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6549 |
|---|
| Symbol | |
|---|
| ID | 5674864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7965342 |
|---|
| End bp | 7966625 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245398 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001510792 |
|---|
| Protein GI | 158318284 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.245344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACCGC TACTGACACC ACTGGCGACG GACCTCGACG GCCACGGCCA CGGCCCGGCG
GGCCCGCCGG CGAACCGACC GATGGCGCAG CCGCTCCGGG TCCTCTACAG CTTCCCGCAT
CCGCTCGGTC TACCCGGGAT CGGCACGACT GCCTACCACC AGGTCATCTC GCTGTGGCGA
CAGGGCATCG AGGTGCAGGT CTACTGCACG AGCGTCGCTC GTCCGCTCCC CCCTGGCCTG
CCGGTGCGCC AGACGATGGC GCTCGGGGGG CAACGCCTGC CGCCCAGAGC GGTCGGAGTG
AAACGCGCCA GGTACTGGCA CGACCGGGTG GTGGCGACCG CACTGGCCCG GGAGTACTTC
GATGTCGCGC ATGTCTGGCC AGGTGCTGCC GTTCACACGC TGCGCGCATG TCGACGACTG
GGCATCCCGG GACTGCGCGA GGCCCCCAAC ACCCACACCG CCCATGCCTG TGACGTTGTC
GCTCGGGAGA CGGCACGCCT GGGTCTGACC ATGCAAAGGA ACTCCAGCCA TGCGCCGAAC
CCGCGTTCGC TGCGGCTGGA AGACGCCGAG TACGGCGCGG CGACCGCGCT GCTGGTCCCG
TCCGATGTCG CCGCCGAGAC GTTCGTGGGA CGAGGTATGC CGGCCGGCCG GCTCGTCCGG
CATCGGTACG GGTTCGATCC GCGCACATTT CCGGCGCCCC GGGCCGAGGA GATGGAAAGA
CCAGGCACCC GGCCACTGCA TGTGGTCTTC GTGGGCCGGT GTGAGCCACG CAAGGGACTG
CATCTACTGC TCGAGGCCTG GCGGAGGTCG GGTCTCGCGG GACGGGCCCG CCTGACGATC
TGCGGGTCGT TCTGGTCCTC GTACCGAGCC CTGCTCGCTC CCGCACTGGC CCAGCCCGGT
GTCGAAACAC CCGGTTTCGT AACGGACGTG CCGGGCCTGC TGCGGTCCGC CGACGTGCTG
GCCCTTCCCT CCCTGGAAGA GGGCAGCGCG CTGGTCACCT ACGAGGCCCA GGCGAGCGGG
TGCGCGCTGC TGGTTTCCCG GCAGTCCGGT GCCGTCCTCA CCCATGGTGA GCAGGGGCTG
CTGCACGAGG CGGGCGATGT CGACACGCTG GCCGCGCACC TGCGGCAGCT GGAACACGAC
CGGAGCCTGC TCGAACGGCT ACGCTGCCGA GCCCTGGCCG CGCGGAAGTC GCTGACCTGG
AACCACGCCG GAACCATTCT CCACGCGGCC TATGAGCGGT CCAGGGCGGC CGCGGTAGAC
GGCGCGGGGA CGGACGCGGC ATGA
|
|---|
| Protein sequence | MTPLLTPLAT DLDGHGHGPA GPPANRPMAQ PLRVLYSFPH PLGLPGIGTT AYHQVISLWR
QGIEVQVYCT SVARPLPPGL PVRQTMALGG QRLPPRAVGV KRARYWHDRV VATALAREYF
DVAHVWPGAA VHTLRACRRL GIPGLREAPN THTAHACDVV ARETARLGLT MQRNSSHAPN
PRSLRLEDAE YGAATALLVP SDVAAETFVG RGMPAGRLVR HRYGFDPRTF PAPRAEEMER
PGTRPLHVVF VGRCEPRKGL HLLLEAWRRS GLAGRARLTI CGSFWSSYRA LLAPALAQPG
VETPGFVTDV PGLLRSADVL ALPSLEEGSA LVTYEAQASG CALLVSRQSG AVLTHGEQGL
LHEAGDVDTL AAHLRQLEHD RSLLERLRCR ALAARKSLTW NHAGTILHAA YERSRAAAVD
GAGTDAA
|
|---|
| |