| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6542 |
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| Symbol | |
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| ID | 5674857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7956832 |
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| End bp | 7958334 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641245391 |
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| Product | undecaprenyl-phosphate galactose phosphotransferase |
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| Protein accession | YP_001510785 |
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| Protein GI | 158318277 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.13322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACAG ATGCCGTGCC GACTGTCCTG GGGGGAGATG CGCCCGTCCC GGCCATCCCT
CGGCAGCGGT GTCCGGACGA ATGGCCGGCG GCCGGCAGCC AGCGGTGGAA GGCACGGCTG
TGCACGCAGC TCGTGGTGAT CGACACTTTG GCGATCGTCG TCGCGATCGT CTGCGCCTAC
CTCCTCCGCT TCGGCATCGA AGCGGAGGCG ACCGCTCGGG GGATGTGGTA CCTGTCCATC
GGCACCTGCA TCGCATTGGC GTGGCTTGTC ATGCTGGGTG CCACCGACGC CTACGCGACG
AGATACCTCG GCGTGGGGAC CGAGGAGTAC CGGCGCATCA GCGTCGGGAC CTTCCGGCTG
TGGGGCGCCA CGACAATCGG GTGCTACGTC CTGCGGGCGG AGGTCGCGCG GGGCTTCTGC
CTGATCGCCC TGCCCCTCGG ACTCCTGCTA CTGCTGACCG GCCGGGCGCT CGCCCGCCTC
CGGTTGGTCT CCGTTCGGCG GACCGGGCAT GCCCGCCACC GGGTCGTGGT GGTCGGCGAC
TCTCGTTCGG TCTTGGAACT CGTCGGTGAG TTCCATCATG AACCCGCGGC CGGATTCGAC
GTCATCGGCG TGTGTGTGCC GAAGGGGGCC CGACGCCCCG ACGGCAACGT CGGTGCTCCC
GTGCTCGGAT CATTGGAACA GGTGAGCTCC GTCGTCGCCG CTACCGGCGC CGACACGGTT
GTGGTCACCT CCTCCGCATC GCTCGACATC GAGACAGCGA AGGGTATTGC CTGGGAGCTG
GAGGGCACCG GGGTCGACCT GGTCGTGGCC CCGCCCCTGG GCGGGATTGC CGGGCCGCGC
GTGTCACTGC GGCCGGTCGC CGGCCTCCCT CTCCTCCACG TGGAGGAGCC GGTGTTCACC
GGCTGGCGAA AGTTCGCCAA GAACATGCTG GACCGGGCCC TCGCCGCCGT CGCTCTCGTC
GTTCTGTGCC CGTTGCTACT CGCCGTCGTG CTGCTCATCC GTTTCGACAG CAGCGGACCC
GCGCTGTTCC GGCAGACACG AACGGGTAAG GACGGACGCG ACTTCGAGAT CCTGAAGTTC
CGCACCATGT ATGTGGACGC CGAGCAGCGC CGGGCGGTAC TGGAGAATCA CAACGAGGCC
GACGGGCTCC TTTTCAAGAT TCGTGACGAC CCCCGGGTGA CCCGGGTCGG GCGGACGCTC
CGTCGGCTGT CCGTCGACGA ACTGCCCCAG TTCGTCAACG TCCTGCGGGG GGAGATGTCG
CTGGTAGGTC CGCGGCCCCC GCTGCCGTCG GAAGTCGCTC GGTACAGCGG ACCCGTACAC
CGCCGATTGA AGGTCAAGCC CGGCCTCACC GGCCTGTGGC AGGTGAGCGG ACGCTCGGAG
CTGCCGTGGC GGGATGCCGT CCGGCTCGAC CTCTACTACG TGGAGAACTG GTCCATCATG
TTCGATCTGA TCATCATCCT GCGGACCGTC CGGGCGGTAC TCGGTAGGTC GGGAGCGTTC
TGA
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| Protein sequence | METDAVPTVL GGDAPVPAIP RQRCPDEWPA AGSQRWKARL CTQLVVIDTL AIVVAIVCAY
LLRFGIEAEA TARGMWYLSI GTCIALAWLV MLGATDAYAT RYLGVGTEEY RRISVGTFRL
WGATTIGCYV LRAEVARGFC LIALPLGLLL LLTGRALARL RLVSVRRTGH ARHRVVVVGD
SRSVLELVGE FHHEPAAGFD VIGVCVPKGA RRPDGNVGAP VLGSLEQVSS VVAATGADTV
VVTSSASLDI ETAKGIAWEL EGTGVDLVVA PPLGGIAGPR VSLRPVAGLP LLHVEEPVFT
GWRKFAKNML DRALAAVALV VLCPLLLAVV LLIRFDSSGP ALFRQTRTGK DGRDFEILKF
RTMYVDAEQR RAVLENHNEA DGLLFKIRDD PRVTRVGRTL RRLSVDELPQ FVNVLRGEMS
LVGPRPPLPS EVARYSGPVH RRLKVKPGLT GLWQVSGRSE LPWRDAVRLD LYYVENWSIM
FDLIIILRTV RAVLGRSGAF
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